Pseudomonas aeruginosa LESB58: PLES_38881
Help
Entry
PLES_38881 CDS
T00818
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pag
Pseudomonas aeruginosa LESB58
Brite
KEGG Orthology (KO) [BR:
pag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pag03016
]
PLES_38881 (rnd)
Enzymes [BR:
pag01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
PLES_38881 (rnd)
Transfer RNA biogenesis [BR:
pag03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PLES_38881 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Ribosomal_L27_C
Motif
Other DBs
NCBI-ProteinID:
CAW28624
LinkDB
All DBs
Position
complement(4297194..4298318)
Genome browser
AA seq
374 aa
AA seq
DB search
MTAPEIQWIRDDASLAQQCREWRTQPYLALDTEFMRVDTFYPAAGLVQVGDGRQEWLIDP
LLIQDWSPFAELLEDERVVKVLHACSEDLEVFLRLTGSLPVPLFDTQLAAAYLGMAHSMG
YSKLVKEVLDIDLPKDETRSDWLQRPLTEMQMRYAADDVQHLAQVYLALDARLSEEKRAW
LLEDGAELVANLCRESDPREAYREVKLGWRLRPQQLAVLRELCAWREEQARLRNRPRNHV
LRERTLWPLARLLPKNKTDLAAIEDMHPRTVRQDGDFLIELIAQASRLPQSEWPEALPEP
LPPEVTPLLKSLRAIGQREAETLGMAPELMLRKKILEALLKSGYPDGPYELPDSLRGWRR
ERMGQALLDALESA
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcgcccgaaatccagtggatccgcgatgatgccagcctggcgcagcaatgccgg
gaatggcgcacacagccgtacctcgcgctcgataccgagttcatgcgcgtcgataccttc
tatcccgcggccggtctggtgcaggtgggcgatggccggcaggagtggctgatcgatccg
ctgctgatccaggactggagccccttcgccgagctgctcgaagacgagcgggtggtgaag
gtgctgcatgcctgcagcgaagacctcgaggtgttcctgcgcctcaccggcagcctgccg
gtgccgctgttcgatacgcagttggccgccgcctatctcggcatggcccattcgatgggc
tactcgaagctggtgaaggaggtgctggacatcgacctgcccaaggacgagacccgttcc
gactggttgcaacggccgctcaccgagatgcagatgcgctacgccgccgacgacgtccag
cacctcgcccaggtctacctggccctggatgcgcggctgagcgaggagaaacgcgcctgg
ctgctggaggacggcgccgaactggtcgccaacctctgccgcgagagtgatccgcgcgag
gcctaccgcgaggtcaagctgggttggcggctgcgtccgcagcaactggcggtgctccgc
gaactctgcgcctggcgcgaggagcaggcacgcctgcgcaaccggccgcgcaaccacgtg
ctgcgcgaacgtaccctgtggccgctggcgcgcctgctgccgaagaacaagaccgacctg
gcggcgatcgaagacatgcatccgcgcaccgtgcgccaggacggcgacttcctcatcgaa
ctgatcgcccaggcttcgcgcctgccgcagagcgaatggcccgaggcgctgcccgagccg
ctgccgccggaggtcaccccgctgctcaagagcctgcgcgccatcggccagcgcgaagcg
gagaccctgggcatggcgcctgagctgatgctgcgcaagaagatcctcgaggcactgctc
aagagcggctatcccgacggtccctacgaactgcccgattccctccgcggctggcgccgc
gaacgcatgggccaggccctgctggacgccctggagagcgcatga
DBGET
integrated database retrieval system
