Pseudoalteromonas agarivorans: PAGA_a0002
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Entry
PAGA_a0002 CDS
T06137
Symbol
dnaN
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
paga
Pseudoalteromonas agarivorans
Pathway
paga03030
DNA replication
paga03430
Mismatch repair
paga03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PAGA_a0002 (dnaN)
03430 Mismatch repair
PAGA_a0002 (dnaN)
03440 Homologous recombination
PAGA_a0002 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paga03032
]
PAGA_a0002 (dnaN)
03400 DNA repair and recombination proteins [BR:
paga03400
]
PAGA_a0002 (dnaN)
Enzymes [BR:
paga01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PAGA_a0002 (dnaN)
DNA replication proteins [BR:
paga03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PAGA_a0002 (dnaN)
DNA repair and recombination proteins [BR:
paga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PAGA_a0002 (dnaN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta_2
DNA_pol3_beta_3
DNA_pol3_beta
HSP20
Motif
Other DBs
NCBI-ProteinID:
ATC80626
UniProt:
A0ACA8DQP8
LinkDB
All DBs
Position
I:1565..2668
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AA seq
367 aa
AA seq
DB search
MQITISREQFLKPLVQVSGAIERKHTLPILSNVLLVVENGQLSMTGTDLEIELVAGVFVG
DDIADTKLTLPAKKLLDICKSLPDGSELTLSLQEHQLLLTSGKSRFSLTTLAAEDFPNLE
QWDGEVEFQLTRLELRKLLESTHFSMANQDVRYYLNGMSFEVDNTDIKTVATDGHRLAIA
QKELGQSLNTQRQLIIPRKGVQEIMRLMVADEELVTIQFGANHIRIIDVEFTFTSKLVDG
RFPDYRRVLPRGGDKVITANREWLRNAFQRVSILSNEKFRGVRLNLANGLLKITANNPEQ
EEAEEIVEVMYEGDELEIGFNVSYVLDVLNTLKTEDVLFTLADSNSSALIEGAGDEEAMY
VVMPMRL
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgcaaataaccatttcaagagaacaatttttaaagccattagtgcaagtatcgggtgcg
attgaacgtaaacatacgttacctatattatctaatgtattgttagtggtagaaaacggg
caactttcaatgacaggcacagaccttgaaattgaactagttgcaggtgtttttgttggt
gatgatattgccgatacaaagttaacgctacctgctaaaaaattactcgatatttgtaaa
agcctgcctgatggttctgagcttacattgagcttacaagagcaccaactgcttttaact
agtggtaaaagccgcttttcacttactacacttgccgcggaagactttcctaatttagag
cagtgggatggcgaggttgagtttcagctaacgcgtttagagttacgtaagttacttgaa
agcacgcatttttcaatggctaaccaagacgttcgttattacttaaatggcatgtcgttt
gaagtagataataccgacataaaaacagtggccaccgatggccaccgtttggcaatagcg
caaaaagaattaggccaatcgttaaatacgcagcgccaattaataataccgcgcaaaggt
gtgcaagaaattatgcgccttatggttgccgatgaagaattagttactattcaatttggc
gctaaccatattcgtattatcgatgtggaatttacttttactagtaagttagtggatggc
cgcttccctgattatcgccgcgtattaccgcgtggtggagataaagtaattaccgctaac
cgtgaatggttacgtaatgcgtttcaacgtgtgtctattttatctaacgaaaaatttaga
ggtgtgcgtttaaaccttgcaaatggcttacttaaaattacggctaataaccctgagcaa
gaagaggctgaggaaatagtagaagtaatgtatgagggtgatgagctagaaattggtttt
aatgtatcgtatgtattagatgtactaaatacattaaaaacagaagatgtactatttaca
ttagcagattcaaacagcagtgcacttattgaaggtgcgggcgatgaagaagcaatgtac
gtggttatgcctatgcgattatga
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