KEGG   Pseudoalteromonas agarivorans: PAGA_a0002
Entry
PAGA_a0002        CDS       T06137                                 
Symbol
dnaN
Name
(GenBank) DNA polymerase III subunit beta
  KO
K02338  DNA polymerase III subunit beta [EC:2.7.7.7]
Organism
paga  Pseudoalteromonas agarivorans
Pathway
paga03030  DNA replication
paga03430  Mismatch repair
paga03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:paga00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PAGA_a0002 (dnaN)
   03430 Mismatch repair
    PAGA_a0002 (dnaN)
   03440 Homologous recombination
    PAGA_a0002 (dnaN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:paga03032]
    PAGA_a0002 (dnaN)
   03400 DNA repair and recombination proteins [BR:paga03400]
    PAGA_a0002 (dnaN)
Enzymes [BR:paga01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PAGA_a0002 (dnaN)
DNA replication proteins [BR:paga03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     PAGA_a0002 (dnaN)
DNA repair and recombination proteins [BR:paga03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     PAGA_a0002 (dnaN)
SSDB
Motif
Pfam: DNA_pol3_beta_2 DNA_pol3_beta_3 DNA_pol3_beta HSP20
Other DBs
NCBI-ProteinID: ATC80626
UniProt: A0ACA8DQP8
LinkDB
Position
I:1565..2668
AA seq 367 aa
MQITISREQFLKPLVQVSGAIERKHTLPILSNVLLVVENGQLSMTGTDLEIELVAGVFVG
DDIADTKLTLPAKKLLDICKSLPDGSELTLSLQEHQLLLTSGKSRFSLTTLAAEDFPNLE
QWDGEVEFQLTRLELRKLLESTHFSMANQDVRYYLNGMSFEVDNTDIKTVATDGHRLAIA
QKELGQSLNTQRQLIIPRKGVQEIMRLMVADEELVTIQFGANHIRIIDVEFTFTSKLVDG
RFPDYRRVLPRGGDKVITANREWLRNAFQRVSILSNEKFRGVRLNLANGLLKITANNPEQ
EEAEEIVEVMYEGDELEIGFNVSYVLDVLNTLKTEDVLFTLADSNSSALIEGAGDEEAMY
VVMPMRL
NT seq 1104 nt   +upstreamnt  +downstreamnt
atgcaaataaccatttcaagagaacaatttttaaagccattagtgcaagtatcgggtgcg
attgaacgtaaacatacgttacctatattatctaatgtattgttagtggtagaaaacggg
caactttcaatgacaggcacagaccttgaaattgaactagttgcaggtgtttttgttggt
gatgatattgccgatacaaagttaacgctacctgctaaaaaattactcgatatttgtaaa
agcctgcctgatggttctgagcttacattgagcttacaagagcaccaactgcttttaact
agtggtaaaagccgcttttcacttactacacttgccgcggaagactttcctaatttagag
cagtgggatggcgaggttgagtttcagctaacgcgtttagagttacgtaagttacttgaa
agcacgcatttttcaatggctaaccaagacgttcgttattacttaaatggcatgtcgttt
gaagtagataataccgacataaaaacagtggccaccgatggccaccgtttggcaatagcg
caaaaagaattaggccaatcgttaaatacgcagcgccaattaataataccgcgcaaaggt
gtgcaagaaattatgcgccttatggttgccgatgaagaattagttactattcaatttggc
gctaaccatattcgtattatcgatgtggaatttacttttactagtaagttagtggatggc
cgcttccctgattatcgccgcgtattaccgcgtggtggagataaagtaattaccgctaac
cgtgaatggttacgtaatgcgtttcaacgtgtgtctattttatctaacgaaaaatttaga
ggtgtgcgtttaaaccttgcaaatggcttacttaaaattacggctaataaccctgagcaa
gaagaggctgaggaaatagtagaagtaatgtatgagggtgatgagctagaaattggtttt
aatgtatcgtatgtattagatgtactaaatacattaaaaacagaagatgtactatttaca
ttagcagattcaaacagcagtgcacttattgaaggtgcgggcgatgaagaagcaatgtac
gtggttatgcctatgcgattatga

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