Pseudoalteromonas agarivorans: PAGA_a0015
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Entry
PAGA_a0015 CDS
T06137
Symbol
fadB
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
paga
Pseudoalteromonas agarivorans
Pathway
paga00071
Fatty acid degradation
paga00280
Valine, leucine and isoleucine degradation
paga00310
Lysine degradation
paga00362
Benzoate degradation
paga00380
Tryptophan metabolism
paga00410
beta-Alanine metabolism
paga00640
Propanoate metabolism
paga00650
Butanoate metabolism
paga00907
Pinene, camphor and geraniol degradation
paga00930
Caprolactam degradation
paga01100
Metabolic pathways
paga01110
Biosynthesis of secondary metabolites
paga01120
Microbial metabolism in diverse environments
paga01200
Carbon metabolism
paga01212
Fatty acid metabolism
Module
paga_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
paga00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
PAGA_a0015 (fadB)
00650 Butanoate metabolism
PAGA_a0015 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
PAGA_a0015 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PAGA_a0015 (fadB)
00310 Lysine degradation
PAGA_a0015 (fadB)
00380 Tryptophan metabolism
PAGA_a0015 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PAGA_a0015 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PAGA_a0015 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PAGA_a0015 (fadB)
00930 Caprolactam degradation
PAGA_a0015 (fadB)
Enzymes [BR:
paga01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PAGA_a0015 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
PAGA_a0015 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
PAGA_a0015 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
PAGA_a0015 (fadB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
ATC80636
LinkDB
All DBs
Position
I:complement(12564..14723)
Genome browser
AA seq
719 aa
AA seq
DB search
MLYKSDSFEVSFLKENIAEFKFCVAGSVNTLSQQTLSDCAAALKELASNSDIKGMIFTSD
KDHFIIGADIFEFLPTFTKPEEELVTWIKNATDVFDAIEDLPFPTLSAINGLALGGGCEW
ALATDYRVASETAKMGLPEVKLGIMPGFGGTVRLPRIIGADNAMLWITSGKENRATDALK
VGAFDAVVSADKLLESSLATLELAITGKLDWQAKRDVKLQPLKLNRVEQGMSFAMAEGMV
MGKTKGHYPAPVMAVRTIKAAANCTRDEAMAIENANFAKLARTNEAAAQTGIFLNDQFIK
GKARKLAKHSDVEIKQAAVLGAGIMGGGIAYQSAYKGTPIIMKDIQQDALDLGMGEASKL
LGAKVKRGHMPMEKMLATLSKIKPTLNDADLQNANIIVEAVVENPKVKQAVLADLEKNMP
EGTVLTSNTSTICIDLLAEALDKPENFCGMHFFNPVPKMPLVEIIRGAKTSDKTINAVVD
YALKLGKSPIVVNDCPGFFVNRVLFPYFAGFSKLVVEGANFAKVDKVMENVFGWPMGPAY
LLDVVGIDTAYHCTGVMADGFPERMARAEKDPVTVFANEKRFGQKNKAGFYKYETDRRGR
LKKSTDATAVELLAPITDAPKEFDKQEIIDRCMIPMINEVLLCLQEGIVASPQEADMALV
YGVGFPPFRGGAFRYLDQTGLANFVAAADKYAHLGAIYQVSEQTRKWAEEGRVFYKVEG
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgttatataaaagcgattcctttgaagttagcttcctaaaggaaaacatcgccgagttt
aagttttgtgttgcaggttctgtaaacacactatctcagcaaactctttcagattgtgca
gcagcattaaaagaattagcgtctaattctgatatcaaaggcatgattttcaccagtgat
aaagatcactttattattggtgcagatatcttcgaatttttaccaacatttactaaacca
gaagaagaattagtaacgtggatcaaaaacgcaaccgacgtttttgacgcaatcgaagac
ttaccattcccaactcttagcgctataaatggcttggcacttggcggcggctgtgagtgg
gcacttgctaccgattatcgcgttgcaagcgaaaccgctaaaatgggcttaccagaagtt
aaactaggtataatgcctggttttggtggcacagtgcgcttaccacgcattattggcgca
gataacgccatgctttggattacctctggcaaagaaaaccgtgccactgatgccctaaaa
gtaggtgcgtttgatgcggtagttagtgctgacaaacttttagagtcaagcctagcaaca
cttgagttagcaattaccggcaaactagattggcaggcaaagcgcgatgttaaacttcag
ccacttaaattaaaccgtgttgagcaaggcatgagctttgcgatggcagaaggtatggta
atgggtaaaaccaaaggccactatcctgctccggttatggcagttcgcactattaaagca
gcggccaactgtactcgcgatgaagcaatggcaatcgaaaatgctaactttgcaaaactt
gcgcgcactaacgaagcagctgcacaaaccggtattttcttaaatgaccagtttattaaa
ggtaaagcacgaaagcttgctaagcacagcgatgttgaaattaaacaagcggctgtatta
ggcgctggtattatgggcggcggtattgcgtaccagtcagcttataaaggcacaccaatc
ataatgaaagacatccaacaggatgcgcttgatttaggtatgggtgaagcatctaaacta
ctgggtgcaaaagttaaacgcggccatatgccaatggaaaaaatgctggcaacgcttagc
aaaattaagccaacgcttaacgatgccgacctacaaaacgccaacattattgttgaagcg
gttgtagaaaaccctaaagttaagcaagcggtattagctgaccttgaaaagaacatgcct
gaaggcacggtacttacatcaaacacatcgactatttgtatcgacttacttgcagaagca
ctcgataagccagaaaacttctgtggtatgcactttttcaacccagtgccaaaaatgcca
ttagtagaaattatccgtggtgcaaaaacctctgataaaacaattaatgcagtcgttgat
tacgcgcttaaacttggcaagtcacctatcgttgttaacgattgccctggcttttttgta
aaccgtgttttattcccttactttgcaggctttagcaaattagttgttgaaggcgctaac
tttgcaaaagtagataaagtaatggaaaacgtatttggctggccaatgggcccggcttac
ctgcttgatgttgtaggtattgatacggcttatcactgtactggcgtaatggctgacgga
ttccctgagcgtatggcacgtgcagaaaaagatccggtaactgtttttgctaacgaaaaa
cgttttggtcaaaagaacaaagcaggtttttacaagtacgaaacagaccgccgtggtcgt
cttaaaaaatcaaccgatgcaacagcagttgagctactagcgccaattactgatgcaccg
aaagaatttgataaacaagaaattatcgaccgttgtatgatcccaatgatcaacgaagtg
cttctttgtttacaagaaggcattgttgcttctcctcaagaagctgatatggcccttgta
tacggcgttggtttccctccatttagaggcggcgcgttccgttacttagatcaaacaggt
ttagctaactttgttgcagcagcagacaaatatgctcacctaggtgcgatttaccaagta
tcagagcaaactcgcaaatgggccgaagaaggtcgtgttttctataaggtggaaggttaa
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