Pseudoalteromonas agarivorans: PAGA_a0141
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Entry
PAGA_a0141 CDS
T06137
Symbol
dbpA
Name
(GenBank) ATP-independent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
paga
Pseudoalteromonas agarivorans
Brite
KEGG Orthology (KO) [BR:
paga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paga03009
]
PAGA_a0141 (dbpA)
Enzymes [BR:
paga01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PAGA_a0141 (dbpA)
Ribosome biogenesis [BR:
paga03009
]
Prokaryotic type
rRNA helicases
PAGA_a0141 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_19
AAA_30
Helicase_C_2
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
ATC80748
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All DBs
Position
I:129485..130873
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AA seq
462 aa
AA seq
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MTSTAFSSLALPAGLVDNLSTLGYSQMTPVQAQSLPPVLAGKDMIAQAKTGSGKTAAFSL
GVLAKLNVKRFRIQSLVLCPTRELAEQVAVEMRKLARGIHNIKILTLCGGVSIGPQIGSL
EHGAHIIVGTPGRVDDHIRKGTLRLDDVETLVLDEADQMLDMGFQDTLDAIIERIPQNRQ
TLLFSATFPRAIEAIAKRVLKNPEMIKVEEEQEKSTIKQYFYKMDNNKQRYSTLKLLLLK
FTPQSCVVFCNTKVETQQVCDDLASEGFSAVALHGDLEQRDRERTLIHFANKSASILVAT
DVAARGLDIDDMDMVINYHLAHDPQTHVHRVGRTGRAGKKGIACSIYGEAEQFKVAQIGD
HYERDFLPEPMPAFSLLEKPPYKPEMVTLMIDSGKKQKVRAGDILGALTGKDGVAGRQVG
KINVLDNVAFVAVERNASKPALRKLTKGNIKGRKIRARRLTR
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
gtgacttctactgcattttcatctttggctttacctgctggtttagttgataatttatca
acacttggctactcgcaaatgacgcctgtacaagcgcaaagcttaccgccggttttggca
ggtaaagatatgattgcgcaagcaaaaaccggttcaggtaaaactgctgcttttagttta
ggtgtgttagctaaattaaatgtaaaacgttttcgtattcaatcgcttgtactttgtcca
acgcgcgaactggccgagcaagtggcagtagaaatgcgtaaacttgcccgcggtattcac
aatattaaaatattaacgctatgtggtggtgtatcaattggcccacaaataggctcgctt
gagcatggggcgcatattattgtgggtacacctgggcgagtggacgatcatattcgcaaa
ggtacactgcgtttagacgatgttgaaacgctggtacttgatgaggcagatcaaatgctt
gatatgggttttcaagatacccttgatgccattattgagcgcataccgcaaaatcgtcaa
acgttgttatttagtgcaacctttccgcgtgcaattgaagctattgcaaagcgcgtatta
aaaaatccagagatgataaaagtagaagaagagcaagaaaaaagcacaataaagcaatac
ttttacaaaatggataacaacaaacagcgttactcaacacttaaattattactacttaaa
tttacaccacaaagctgtgttgttttttgtaataccaaggtagaaacacaacaagtttgt
gatgatttagcaagtgaaggctttagtgcagtggcgttgcacggtgatttagagcagcgt
gatcgcgaacgtacgttaattcattttgctaataaaagtgcctcaatattagttgctacc
gatgttgccgcgcgtggcttagatattgacgacatggacatggtaataaattaccattta
gcacacgacccacaaacccatgtgcaccgtgtagggcgcacaggccgagcgggtaaaaaa
ggtattgcgtgttctatttacggtgaggctgagcagtttaaagtggcgcaaataggcgac
cattacgaacgagactttttgccagagccaatgccagcttttagtttattagaaaagccg
ccttacaagcctgaaatggttaccctaatgatcgactcgggcaaaaagcaaaaagtgcgc
gctggtgatattttaggtgcacttactggcaaagatggtgttgcaggacgccaagtaggt
aaaataaatgtactcgataacgttgcctttgtagccgttgagcgcaatgcatcaaaacct
gcgcttcgtaaattaaccaagggcaatattaaagggcgtaaaattcgtgcccgtcgcctt
acccgttaa
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