Pseudoalteromonas agarivorans: PAGA_a0222
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Entry
PAGA_a0222 CDS
T06137
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
paga
Pseudoalteromonas agarivorans
Pathway
paga00300
Lysine biosynthesis
paga00470
D-Amino acid metabolism
paga01100
Metabolic pathways
paga01110
Biosynthesis of secondary metabolites
paga01120
Microbial metabolism in diverse environments
paga01230
Biosynthesis of amino acids
Module
paga_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
paga00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PAGA_a0222 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PAGA_a0222 (lysA)
Enzymes [BR:
paga01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PAGA_a0222 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ATC80818
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All DBs
Position
I:complement(212344..213549)
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AA seq
401 aa
AA seq
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MSFLSTPTKAAVNTLTQQLDTPFFVYDLDKLNAHLAHLVAQTDVKLWYAVKANPLSKVIQ
CLDSAGFNFDVASKGELEQVLAQGISSQRVLNTGPAKSPKQIKHFIERGVRIFVAESLNQ
VRWLNQQAQLQNTQLQVLLRVQLRWPEGEKNPLGGDSLTPFGLGCDEWQALNTGDYPALS
FDGLHIFQWGNMLSTQKLSELWSQMIAPLTALASNLNINLKILDLGGGLGIPYTPNDATL
EWDDLIAALAKIKKDAGVDELWMELGRYAVGECGHYANPVVECKQNYGQQQVILTGGINH
LLRPAVTSQDFPAALLRESTAPEQAMSLYGPLCTALDCLGEHSLPSDLNEQDWLVFSQCG
AYGFTESMPYFLCHELAAEYVLQNGELTCVRQAEDASHYLR
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgagctttttgagcacgcctaccaaggccgccgtaaatacacttactcagcaacttgat
acacctttttttgtttacgacttagacaaactaaacgcacaccttgctcatttagttgcg
caaaccgatgtaaagctttggtatgcggtaaaagccaatccgctttctaaggttattcaa
tgcctagacagcgccggatttaactttgacgtagcaagtaaaggtgagcttgaacaagtc
cttgcacaaggaattagttcacagcgcgtgctcaacacagggcctgcaaagagccctaaa
caaattaaacactttattgagcgcggcgtacgtatttttgttgccgaaagcctcaatcaa
gtacgttggttaaaccaacaagcacaactgcaaaatacgcagctgcaagttttattgcgt
gtgcaactacgctggcctgaaggtgaaaaaaacccactgggcggcgacagccttacacca
tttggtttgggctgcgatgaatggcaagcactcaatactggcgattacccagccctaagc
tttgacggtctgcatatttttcagtggggtaatatgcttagcacgcaaaagctaagcgag
ctgtggtcgcaaatgattgcaccgcttacagcccttgccagtaacttaaatataaacctt
aaaattttagacttaggcggcggtttaggtattccttatacaccaaacgatgcaacactt
gagtgggatgaccttatagccgcgcttgctaaaattaaaaaagatgcgggtgtagacgag
ctttggatggagcttggccgttacgctgtaggcgaatgcggtcattacgctaaccccgtc
gttgagtgcaaacaaaactacgggcaacagcaagttattttaaccggtggtattaaccac
ttattgcgcccagctgttacaagccaagattttcctgcggcgttactgcgcgaatcaaca
gcgccagaacaagcaatgagcttatatggcccattatgtactgcccttgattgcttaggc
gagcatagcctaccaagcgatttaaacgagcaagactggctggtgtttagccaatgcggc
gcctatggttttaccgaaagcatgccgtattttttatgccatgagctagcagctgaatac
gtgttacaaaatggtgagctcacgtgtgtgcgccaagcagaagatgccagtcactactta
aggtaa
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