Pseudoalteromonas agarivorans: PAGA_a0228
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Entry
PAGA_a0228 CDS
T06137
Name
(GenBank) OmpA-OmpF porin, OOP family
KO
K03286
OmpA-OmpF porin, OOP family
Organism
paga
Pseudoalteromonas agarivorans
Brite
KEGG Orthology (KO) [BR:
paga00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
paga02000
]
PAGA_a0228
Transporters [BR:
paga02000
]
Other transporters
Pores ion channels [TC:
1
]
PAGA_a0228
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
OprF
Phage_OMP
Motif
Other DBs
NCBI-ProteinID:
ATC80823
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All DBs
Position
I:218157..219212
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AA seq
351 aa
AA seq
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MKLKSLTIAIALAATSASSFAADKEEGFYIGAFGDYYDASWENMRAQAGLDVNESTGWGV
EAGYRFSDYWSARLEYADMDFNAFDKAAGNRNNIDGERYGIDALYHLDGGPFYGLFGIKE
MDVVDDNTFLNAGVGYQHFITDGFFVNAETAVYQGLDKGYTDVGAKIGINYLFGQNSMPA
QPVEPAPTVVEVPVEPKDSDSDNILDKDDKCPNTPMTDAVDGDGCTLYEDREVTTSLLVT
FPHDSAQVGQRYFDDIASVSEFLKEHEDTTVLLEGHASAVGNANYNKMLSKKRADDVAQE
LIKDGIAEDRITTVGLGEERLKNTANTKEAHAENRRVEAHVKSIERVKVKR
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaaaatcacttacaattgcaattgcgttagctgcaactagcgcgtcttcattc
gctgccgataaagaagaaggtttctacattggtgcatttggtgactactatgatgcgtca
tgggaaaacatgcgcgctcaagctggccttgacgtaaacgagtcaactggttggggtgta
gaagcaggttaccgtttcagcgattactggagcgcacgccttgagtatgcagatatggac
tttaacgcgttcgataaagctgcgggcaatcgtaataatatcgacggcgagcgttacggt
attgatgcgctttaccaccttgacggcggccctttctacggtctattcggtattaaagaa
atggacgtagtagatgacaacacattcttaaacgcaggtgttggttaccaacactttatt
actgatggctttttcgtaaacgctgaaactgcggtataccaaggtcttgataaaggttac
acagatgtaggtgctaaaattggtattaactacttatttggccaaaactctatgcctgca
cagcctgtagagccagcgcctacagtagtagaagtacctgtagaacctaaagacagcgac
agcgacaacatcctagataaagatgataaatgtcctaacacgccaatgacagacgctgtt
gatggcgatggctgtactttatacgaagaccgtgaagtaacaacaagcttattagttact
ttcccacatgattctgcacaagttggtcaacgttactttgacgacattgcatcagtatct
gagttcttaaaagagcacgaagatacaactgtactacttgaaggccacgcgtcagcggta
ggtaacgcaaactacaacaagatgctttctaaaaagcgtgctgatgatgtagcacaagag
ctaattaaagatggcattgctgaagatcgcattacaactgttggtctaggtgaagaacgt
cttaaaaacacagctaacacgaaagaagctcacgctgaaaaccgtcgtgtagaagcacat
gtaaaatctattgaacgtgtaaaagttaagcgttaa
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