Pseudoalteromonas agarivorans: PAGA_a0517
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Entry
PAGA_a0517 CDS
T06137
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
paga
Pseudoalteromonas agarivorans
Pathway
paga00521
Streptomycin biosynthesis
paga00523
Polyketide sugar unit biosynthesis
paga00541
Biosynthesis of various nucleotide sugars
paga01100
Metabolic pathways
paga01110
Biosynthesis of secondary metabolites
paga01250
Biosynthesis of nucleotide sugars
Module
paga_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
paga00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PAGA_a0517 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PAGA_a0517 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PAGA_a0517 (rfbC)
Enzymes [BR:
paga01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
PAGA_a0517 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ATC81068
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All DBs
Position
I:508463..509008
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AA seq
181 aa
AA seq
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MKVIDTAIADVKIIEPAVFGDERGFFMETFREDWFRKNVADVTFVQDNHSKSGQGILRGL
HYQTQQTQGKLVRVTAGEVYDVAVDMRKDSATFGLHVGVLLSGDNKRQLWVPAGFAHGFY
VISENAEFVYKCTDYYAPQFEQSVLWSDPALNIQWPLVDGKAPLLSAKDEAGLLQINAPA
F
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtaattgatacggccattgcagatgtaaaaattattgagcctgcggtgtttggt
gatgagcgtggtttttttatggaaacctttcgtgaagattggtttcgtaaaaatgtagct
gatgtgacctttgtgcaagataaccacagtaaatctggccagggtatattacgcggactg
cattatcaaacccagcaaacacaaggcaagcttgttcgtgttacagccggcgaagtttac
gatgtagcggttgatatgcgcaaagacagtgcaacctttggcctgcatgttggtgtgtta
ctcagtggcgacaataagcgtcaactatgggtaccagcagggtttgctcacggcttttat
gtaatcagtgaaaacgctgagtttgtatataagtgtacagattattatgcgccacaattt
gagcaaagcgtattgtggagtgatccagcattaaatattcagtggccgctcgttgatggc
aaagccccgttattatctgcgaaagacgaagcaggtttacttcagattaacgcccccgcc
ttttaa
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