Pseudoalteromonas agarivorans: PAGA_a0518
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Entry
PAGA_a0518 CDS
T06137
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
paga
Pseudoalteromonas agarivorans
Pathway
paga00521
Streptomycin biosynthesis
paga00523
Polyketide sugar unit biosynthesis
paga00525
Acarbose and validamycin biosynthesis
paga00541
Biosynthesis of various nucleotide sugars
paga01100
Metabolic pathways
paga01110
Biosynthesis of secondary metabolites
paga01250
Biosynthesis of nucleotide sugars
Module
paga_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
paga00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PAGA_a0518 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PAGA_a0518 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
PAGA_a0518 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PAGA_a0518 (rfbB)
00525 Acarbose and validamycin biosynthesis
PAGA_a0518 (rfbB)
Enzymes [BR:
paga01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
PAGA_a0518 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
adh_short
KR
NAD_binding_10
NmrA
Motif
Other DBs
NCBI-ProteinID:
ATC81069
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All DBs
Position
I:509021..510085
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AA seq
354 aa
AA seq
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MTKTIFVTGGAGFIGSALVRFLINETSHTVVNFDKLTYAGNLESLRSVEESERYHFVQGD
ICDRDTVSAVFAKYQPDFIMHLAAESHVDRSIDGPDEFIQTNIVGTYELLEAARNYYTNL
SDNKKAYFRFHHISTDEVYGDLGETGLFTEETSYEPSSPYSASKAASDHLVRAWHRTYQL
PVVLTNCSNNYGPYHFPEKLIPLIILNALEGKQLPVYGDGKQVRDWLFVEDHARALYKVV
SEGKLGDTYNIGGFNEMQNIEVVTTICNHLNDLIKDKPANLTDFKELITFVADRPGHDVR
YAIDATKINKELGWHPEETFESGILKTIQWYLDNQAWCKNVQDGSYQRERLGSN
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgactaaaacaatatttgtaaccggcggcgcgggctttattggctcggccttagtgcgt
tttttaataaatgaaacttcacatactgtggttaactttgataagttaacttatgcaggt
aacctggagtcattgcgttcagttgaagagtcagagcgttatcattttgtgcaaggcgat
atttgcgaccgcgatacagtatcagcagtatttgcaaagtatcagccagattttattatg
cacttagccgcagaaagccatgttgaccgctcgatagatggcccagatgagtttattcaa
acaaacattgtgggtacatacgaattactcgaagctgcgcgcaattactatacaaattta
agtgataataaaaaggcttattttcgttttcatcatatttcgaccgatgaagtctatggc
gatttaggcgaaacaggtttgtttactgaggaaacctcttacgagccaagctcgccttac
tcggcctcaaaagcagcatcagaccacctagtacgtgcatggcatcgtacgtatcaacta
ccagtagtgttaacgaactgctcgaacaattatggcccttatcatttcccagaaaagtta
atcccacttattattttaaatgcgctggaaggtaagcaactccccgtctacggcgatggt
aagcaagtgcgtgactggttatttgtagaagaccatgcgcgagcactttataaagttgtt
agtgaaggcaagttaggcgatacctataatattggaggctttaacgaaatgcagaatatt
gaagttgtcaccacaatttgcaatcacctaaatgacctaattaaagataagccagctaac
ttaacagactttaaagagctgatcacgtttgtggctgaccgcccagggcatgatgtacgt
tatgcaattgatgccactaaaatcaataaagaattaggctggcacccagaagagaccttt
gagtcagggattttaaaaaccattcagtggtatttagataaccaagcttggtgtaaaaat
gtacaagatggcagttaccaacgtgaacgcttaggcagtaattaa
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