Pseudoalteromonas agarivorans: PAGA_a0556
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Entry
PAGA_a0556 CDS
T06137
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
paga
Pseudoalteromonas agarivorans
Pathway
paga00730
Thiamine metabolism
paga01100
Metabolic pathways
paga01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
paga00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
PAGA_a0556 (thiC)
Enzymes [BR:
paga01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
PAGA_a0556 (thiC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ATC81100
LinkDB
All DBs
Position
I:539742..541694
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AA seq
650 aa
AA seq
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MSNTTNKSTRRETRAAASDYIYNLTGQPFPSSQKVYVEGSQSGVRVGMREITLSDTFIGG
DEQNPVYEPNDPLRVYDTSGPYTDPNFELDVRKGLPKFREQWIKERNDTEVLDSVTSQFA
QQRMADDGLDHIRFDHLPKIRRGKAGKNVTQMHYARQGIITPEMEYVAIRENMGRAQIRE
ELLAAQHKGESFGASIPDFITPEFVRDEIARGRAILPNNINHPETEPMIVGRNFLVKVNA
NIGNSSVSSSIEEEVEKMVWSTRWGADTVMDLSTGRYIHETREWVVRNSPVPIGTVPIYQ
ALEKVNGVAEDLTWEIFRDTLIEQAEQGVDYFTIHAGVLLRYVPMTAKRVTGIVSRGGSI
MAKWCLAHHKENFLYTHFEDICEILKQYDVCFSLGDGLRPGSIADANDEAQFSELRTLGE
LTKIAWKHDVQVFIEGPGHVPMHMIKANMDEQLEHCGEAPFYTLGPLTTDIAPGYDHITS
GIGAAQIAWYGCAMLCYVTPKEHLGLPNKEDVKEGLITYKIAAHAADLAKGHPGAQERDN
ALSKARFEFRWHDQFNIGLDPERAREYHDETLPQESGKVAHFCSMCGPKFCSMKITQEVR
DYAKDLESRGIDPNSVGDAIEIKMVDVEAQMKAKSEEFKQTGSEIYHKAI
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacactacaaataagtctacacgacgagaaacgcgcgctgctgcgtcagattac
atttataatttaacgggtcagccatttccaagctcacaaaaagtgtatgttgagggcagc
caaagcggtgtacgcgtgggtatgcgcgaaattacattaagcgatacgtttattggtggc
gatgagcaaaaccctgtgtatgagccaaacgatccactgcgtgtttacgatacatcaggc
ccgtataccgaccctaactttgagctagacgtacgtaagggattacctaaatttcgtgag
cagtggataaaagagcgcaacgacaccgaagtgctcgactcagtcacttcgcaatttgct
cagcaacgtatggccgatgacggccttgatcatattcgctttgatcatttacctaaaatt
cgccgcggtaaagcgggcaaaaacgtgacgcaaatgcattatgctcgccaaggcattatt
acccctgaaatggaatacgtagccatacgcgaaaacatgggtcgtgcacaaattagagaa
gagctgctagcagcacagcataaaggcgaatcgtttggggcgagtattcccgattttatt
acccctgaatttgtacgcgacgaaatagcccgcggtcgcgctattttaccaaataatatt
aaccaccccgaaaccgagcccatgatagttggccgtaactttttagttaaagttaacgct
aatattggtaattcatcggtaagctcatcaatcgaagaagaagtagaaaaaatggtgtgg
tctacccgctggggtgccgataccgtaatggatttatcaaccgggcgttacattcacgaa
acccgtgaatgggtagtacgcaactcgcctgtgcccattggcacggtaccaatttatcag
gcgctagaaaaagtaaacggagtggccgaggatttaacgtgggagatatttcgcgatacg
ctaattgaacaagccgagcagggcgttgattactttactattcatgccggcgtattactg
cgttacgtgccaatgacggcaaagcgtgtaaccggtattgtatcgcggggtggctcaatt
atggctaagtggtgtttagcgcaccataaagaaaactttttatatacgcactttgaagat
atttgcgaaattttaaaacaatacgatgtgtgtttttcgctcggagatggccttcgtcca
ggctcgattgctgatgccaacgacgaagcgcaatttagtgagctacgtacgttaggggag
cttacaaaaattgcgtggaaacacgatgtacaagtatttattgaaggcccaggccatgtg
ccaatgcatatgattaaagccaatatggatgaacaattagagcattgtggcgaagcgcct
ttttacacattaggccctttaacgaccgatatagcaccagggtacgaccatataacatcg
ggtataggcgctgcacaaatagcgtggtacggctgtgccatgctgtgttatgtaacacca
aaagagcatttaggtttgcccaataaagaagatgtaaaagagggcctaattacctacaaa
attgcagcgcatgcggccgacttagccaaaggccaccccggcgctcaagagcgcgataat
gcgttatctaaagcgcgctttgaatttagatggcacgaccaatttaacattggtttagac
ccagaacgtgcccgtgaatatcacgacgaaaccctaccgcaagagtctggcaaagtagcg
cacttttgctctatgtgtggccctaaattttgctcaatgaaaattacccaagaagtacgc
gattacgccaaagatctcgaatcacgcgggatcgatcctaacagtgttggtgatgcaatt
gagatcaaaatggttgatgtagaagcgcaaatgaaagcgaaatctgaagagtttaaacaa
acgggctcagaaatttaccacaaagcaatataa
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