Pseudoalteromonas agarivorans: PAGA_a0565
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Entry
PAGA_a0565 CDS
T06137
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
paga
Pseudoalteromonas agarivorans
Pathway
paga03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
paga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PAGA_a0565 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paga03400
]
PAGA_a0565 (mutM)
Enzymes [BR:
paga01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
PAGA_a0565 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PAGA_a0565 (mutM)
DNA repair and recombination proteins [BR:
paga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PAGA_a0565 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
ATC81109
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All DBs
Position
I:547842..548651
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AA seq
269 aa
AA seq
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MPELPEVEVSRLGITPHVENQVVTKVNIYNASMRWPVPDDVYQLEGLKVERIERRAKYLL
LHCELGSAILHLGMSGNLRVVDKREPLKKHDHVEFVLSNDKALRLNDPRRFGCCLWQAPG
DVHKLLSKLGPEPLTDDFFAKRVYEQSRNKKVPVKQFIMDNAVVVGVGNIYANESLFKAG
IHPKREAGKVSLKRYQTLIPIIKDTLAAAIIQGGTTLKDFAQSDGKPGYFAQQLLVYGRK
GEACVTCKTPLEEIRLGQRSTVFCKHCQK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccagaggtagaagtaagtagactggggatcaccccgcatgtagaaaac
caggtagtgacgaaggtaaatatttataatgccagcatgcgatggcctgtgcctgatgat
gtttatcagttagaagggttgaaggtagagcgaattgagcgccgtgcaaagtatttattg
ctgcactgcgaattagggagtgctattttacatttgggaatgtcgggtaatttgcgcgtt
gtggataaacgcgagccgcttaaaaagcatgatcatgttgagtttgttcttagtaatgac
aaggcgctgcgattaaacgaccctcgccgctttggttgctgtttatggcaagcaccgggg
gatgttcataagttactttcaaaacttggccctgagccgcttacggatgatttttttgca
aagcgtgtatacgagcaatcgcgaaataaaaaagtccccgtgaagcaatttattatggat
aacgcggtggtggtgggcgtaggtaatatttatgccaatgagtcgttatttaaggcggga
atacacccaaaacgcgaagcaggcaaagtatcgctaaagcgttatcaaaccctgatccct
attattaaagacactctagcagcggcaataatacaaggcggtacaacccttaaagacttt
gcccaaagtgatggcaaaccaggttattttgcacagcagttgttagtgtacgggcgaaaa
ggagaggcgtgcgtaacgtgtaaaacgccacttgaagaaattaggctagggcagcgcagt
acggtgttttgtaagcactgccaaaaatag
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