Pseudoalteromonas agarivorans: PAGA_a0688
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Entry
PAGA_a0688 CDS
T06137
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
paga
Pseudoalteromonas agarivorans
Pathway
paga03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
paga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PAGA_a0688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paga03400
]
PAGA_a0688
Enzymes [BR:
paga01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PAGA_a0688
DNA repair and recombination proteins [BR:
paga03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PAGA_a0688
Prokaryotic type
PAGA_a0688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
BESS
Motif
Other DBs
NCBI-ProteinID:
ATC81218
LinkDB
All DBs
Position
I:663785..664447
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AA seq
220 aa
AA seq
DB search
MSDWPAFLEYELQQPYMQQTLDYVAKRRVEGVAVYPPKEQVFSAFEATALNNIRVVILGQ
DPYHGEGQAHGLCFSVLPEVKKLPPSLKNMYKELATDIPGFEIPDHGYLQSWAEQGVFLL
NTVLTVEQGQAHSHKHLGWEQFTDNVIAHINAHCKGVVFILWGAHAQKKGKNINSARHHI
LKGPHPSPLSAHRGFFGCKHFSQTNELLQAQGDTPINWQV
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattggccagcctttttagaatatgaattacagcaaccttatatgcagcaaaca
ttagattatgtagcaaaacgccgtgtcgaaggtgttgctgtgtacccacccaaagaacaa
gtatttagcgcctttgaagcgacagcccttaacaatattcgcgtggttattttaggccaa
gacccataccacggagaaggccaagcccatggcttatgtttttctgtgttgccagaggtt
aaaaagttaccgccgtcgttaaaaaatatgtacaaagaattggcaacggatattcccggt
tttgaaataccagaccatggctacttacaaagctgggcagagcagggcgtgtttttactc
aatacagtactcacggttgagcaaggccaagcgcattcgcataaacatttagggtgggag
caatttaccgataacgtgatagctcatataaatgcacactgcaaaggagtggtgtttatt
ttatggggcgctcatgcgcaaaaaaaaggtaaaaatattaacagcgctcgccatcatatt
ttaaaagggcctcacccgtcgccgctttctgcgcatcgtggtttttttggctgtaagcac
ttttcacaaacaaatgaattgttacaagcccaaggcgatacgcccattaactggcaggtt
taa
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