Pseudoalteromonas agarivorans: PAGA_a0849
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Entry
PAGA_a0849 CDS
T06137
Symbol
sms
Name
(GenBank) DNA repair protein RadA / Sms
KO
K04485
DNA repair protein RadA/Sms
Organism
paga
Pseudoalteromonas agarivorans
Brite
KEGG Orthology (KO) [BR:
paga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paga03400
]
PAGA_a0849 (sms)
DNA repair and recombination proteins [BR:
paga03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PAGA_a0849 (sms)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
ChlI
Zn_ribbon_LapB
DnaB_C
AAA_22
DUF7125
Lon_C
SLFN-g3_helicase
AAA
nSTAND3
AAA_16
ABC_tran
NPHP3_N
AAA_18
AAA_14
Rad51
cobW
AAA_19
AAA_30
ATPase_2
AAA_11
NACHT
TsaE
VapE-like_dom
Thymidylate_kin
CobU
NTPase_1
DUF5906
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
ATC81348
LinkDB
All DBs
Position
I:804897..806282
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AA seq
461 aa
AA seq
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MAKAAKVEFVCTECGMNYQRWQGQCRCGAWNTLAEFKPSAGQSKKAAARATVGGYAGGIG
GGSKKIDDVATTEAEKQLTEIGELDRVLSGGVTTGSVNIISGDPGAGKTTLLSDLVARMS
QRMPSLYCTAEESLSQFKNRVNRLKLNYNADELYLLSETSVETIIEELDKNKIKFAVIDS
IQAVVTDTANGSPGSPSQVKSAAQALTQYCKQNDVTMFIIAHVNKNNEIAGPQTLVHIVD
ALLHIDTNDGQVRTLRANKNRFGDIDTVGIFKMCERGMLSVDNPSEIFLSGSSTESPGST
ITCIRKGNRNLLLEIQCLTTETEAEFPQRVCVGLNMNRIKMLTGILRKHTKTKIFHDTFF
NIVGGLRIDETETCIDLALVTALLSSLNEFVVPRTTCIMGELSLNGDVRPIDSGVPRVKE
AAQHGFTEIFIPFRNYHKSMEGLGAKITPVKTVHELLSLIN
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggcggcaaaagtagaatttgtttgtacagagtgtggtatgaactaccaacgt
tggcaaggtcaatgtcgctgtggtgcgtggaacacgttggcagaatttaaaccctctgca
gggcaaagtaaaaaagccgctgcgcgagcaaccgttggtggttatgcaggtggcattggt
ggcggctctaaaaaaattgatgatgtagccaccaccgaggccgaaaagcagctaacagaa
ataggcgagcttgaccgtgtactaagcggcggcgtaaccacgggctcggttaatattata
tcaggcgacccaggggcgggtaaaacaacgctgttatctgatttagtagccagaatgtcg
cagcgtatgccatcactttattgtactgctgaggagtcgttgtcgcagtttaaaaaccgt
gtaaaccgcttaaagcttaactataacgccgatgagctttatttactttctgaaactagc
gtagaaaccattattgaagagcttgataaaaataaaattaagtttgctgttatcgactct
attcaggcggttgtaaccgacactgcaaatggcagccctggttcgccttcgcaagtaaaa
agtgccgcacaagcgcttactcagtattgtaagcaaaacgatgtcactatgtttattatt
gcccatgttaataaaaataacgaaattgcagggccgcaaacattagtgcatatagtggat
gccttattgcacattgacacgaatgatggacaggtacgtacgcttagagctaacaaaaac
cgttttggtgatattgataccgtaggcatttttaaaatgtgcgaacgcggcatgctaagt
gttgataaccccagcgagatttttttatcgggatcaagtactgaatcaccaggctctact
attacgtgtatccgaaaaggtaaccgtaacttattgctcgaaattcaatgtttaaccacc
gaaaccgaagccgaatttccgcagcgtgtgtgcgtgggtttaaacatgaaccgaataaaa
atgctcactggtattttacgcaaacacaccaaaactaaaatatttcacgatacgtttttt
aatattgtgggcggcttacgaatcgatgaaaccgaaacctgtattgatttagcgttagta
actgcgcttttaagcagcttaaacgagtttgttgtaccgcgtacaacctgcattatgggt
gagcttagtttaaacggcgatgtgcgcccaatcgacagtggtgtaccacgggttaaagaa
gcggctcagcatgggtttactgaaatatttattccgtttcgtaattaccataaatcgatg
gaaggattaggggctaaaattacgccagtaaaaaccgtgcacgagttactgagtttaatt
aattaa
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