Pseudoalteromonas agarivorans: PAGA_a0897
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Entry
PAGA_a0897 CDS
T06137
Name
(GenBank) hypothetical protein
KO
K21470
L,D-transpeptidase YcbB
Organism
paga
Pseudoalteromonas agarivorans
Brite
KEGG Orthology (KO) [BR:
paga00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
paga01002
]
PAGA_a0897
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
paga01011
]
PAGA_a0897
Peptidases and inhibitors [BR:
paga01002
]
Cysteine peptidases
Family C82
PAGA_a0897
Peptidoglycan biosynthesis and degradation proteins [BR:
paga01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
PAGA_a0897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
ATC81387
LinkDB
All DBs
Position
I:846740..848056
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AA seq
438 aa
AA seq
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MKGLFSKALSTKVKHITLHATLAGCVSTMLTGQALGTADLESVALANSSLTTYNSQQQLQ
NGDYHFDQNAAQLIARTEKAINWYTEIVNSGGFTPLYTNELLELGSTSKAVSQLALRLYQ
ERDLTSNVCDTAMCTFDKTIEQAVQQFQRRHGLKVDGRVGKRTLAKLNVPAKKKLAKLKL
NFYRITNFAGSSDSQYVYVNIPEYTLRYVKAGEVKLQNNVIVGKPSWETPAFSDEIEKFV
VNPEWRIPTSIATKEIAPKVAKDPQYLAKNNIEVRKNSYLDSKTVNPSNIDWQSIKPYQF
DHFLVKRAGDENPLGEVKYLFPNPEAIYVHDTPAKQRFNQAQRALSHGCIRVEEPFSLAR
EIIKHQGEERTLKQVDKARDTDTTQTFYLNEPLPIHLVYWTAWVDEDMLVNFRDDIYQHD
AKALLKNEDQSVIAALIK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggggttattttcaaaggcattgtctacaaaggtaaaacacattacgttacacgct
acgctcgcaggctgcgttagcaccatgctaacagggcaagcgctaggcactgcagatctt
gaaagtgtggcacttgccaactcttcattaaccacttacaactcgcaacaacaattgcaa
aatggcgattatcattttgatcaaaatgcagcacagttaatagcgcgcaccgaaaaagca
attaactggtacacagaaatagttaacagtggcgggtttactcctttatacactaatgag
ttgcttgaacttggcagcaccagtaaagcggtgagtcagttagcgctgcgtttgtatcaa
gagcgtgacttaactagcaatgtatgtgacaccgcaatgtgcacatttgataaaaccata
gagcaggctgtgcaacagtttcagcgtcgccacggtttaaaggttgatgggcgagtagga
aagcgcaccttagctaagcttaatgtacccgctaagaaaaaattggctaaattaaagctt
aacttttaccgcataactaacttcgcaggctcaagtgattcgcagtatgtgtatgtaaac
atacctgagtacacattgcgctatgtaaaagcaggcgaagtaaaactacaaaataacgtt
attgtgggtaagccgagttgggaaacacctgcctttagtgacgaaatcgaaaaatttgta
gtaaaccctgagtggcgcataccaacctctattgcaaccaaagaaatagcaccaaaggtg
gcaaaagatcctcagtaccttgctaaaaataatatcgaagttagaaaaaacagctaccta
gattctaaaacagttaaccccagtaatattgattggcagtctattaagccctatcagttt
gatcactttttagttaagcgggcaggggatgaaaacccacttggcgaagtgaaatatctg
tttccaaatcctgaagccatttatgttcacgatacgccagcaaagcagcgttttaaccaa
gcgcagcgtgcgttatcacatggttgtataagggttgaagagccattttcattggcgcgt
gaaataattaagcaccaaggtgaagagcgcactcttaagcaagtggataaagccagagat
accgataccactcaaactttttatttaaatgagcccttacctattcatttagtgtattgg
acggcgtgggttgatgaagacatgctcgttaattttagagacgatatttatcaacacgac
gcaaaagcattacttaaaaacgaagatcagtcagtcattgctgcattgattaaatag
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