Pseudoalteromonas agarivorans: PAGA_a0945
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Entry
PAGA_a0945 CDS
T06137
Symbol
recO
Name
(GenBank) DNA repair protein RecO (recombination protein O)
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
paga
Pseudoalteromonas agarivorans
Pathway
paga03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PAGA_a0945 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paga03400
]
PAGA_a0945 (recO)
DNA repair and recombination proteins [BR:
paga03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PAGA_a0945 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PAGA_a0945 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
ATC81427
LinkDB
All DBs
Position
I:883392..884084
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AA seq
230 aa
AA seq
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MDSDFYTAYLLHRRPYSDSQVMLDMLVEGVGQLRMLARVSGRQATKHKAQLQPFQALLVH
YSGKYDLKYINKFELHGNPLYLTKDKLYCGFYLNELTNRIVPVNEPLEQVFELYKTHLEN
LNSDVDLQSVLRSYEFQLLELLGYGVDFSFDASGEPIDERQTYSYFPELGFLMQQDTRSG
FSGAQLKAIANHDFSQSDVLYMAKQLSRYLLKPLLGNKPLKSRELFMASQ
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggatagcgacttctacacagcgtacctattacatcggcgtccttatagcgactcccaa
gtaatgctcgatatgctggtagaaggcgtaggccagcttagaatgctagccagagtgagt
ggtcgccaggccactaaacacaaagcacaattacagccttttcaggcactgcttgttcat
tacagtggcaagtacgatttaaaatacattaataaatttgagctacatggtaatccttta
tatttaactaaggataagctttactgtggcttttatttaaatgagctgactaaccgcatt
gtgccggtaaacgagccacttgaacaagtgtttgagctctacaaaactcacctagagaac
ttaaatagcgatgtcgatttacagtcggtgctgcgctcatacgaatttcaattattagag
ttgttgggttatggcgttgactttagctttgatgccagtggtgagccaattgatgaaagg
caaacgtatagttactttcctgagttgggttttttgatgcaacaagatacgcgctcaggg
tttagcggcgcgcagctcaaagcgattgctaatcatgattttagccaaagcgatgtactc
tatatggcaaaacaattaagccgttatttactaaaacctttactgggtaataaaccatta
aaaagccgtgaattatttatggcctctcaataa
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