Pseudoalteromonas agarivorans: PAGA_a0949
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Entry
PAGA_a0949 CDS
T06137
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil1939-C5)-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
paga
Pseudoalteromonas agarivorans
Brite
KEGG Orthology (KO) [BR:
paga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paga03009
]
PAGA_a0949 (rumA)
Enzymes [BR:
paga01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
PAGA_a0949 (rumA)
Ribosome biogenesis [BR:
paga03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PAGA_a0949 (rumA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
TRM5-TYW2_MTfase
MTS
Methyltransf_25
PCMT
Methyltransf_15
Cons_hypoth95
FtsJ
DOT1
PrmA
Methyltransf_11
Methyltransf_23
RrnaAD
Methyltransf_4
TPMT
N6_N4_Mtase
Thioredoxin_13
Motif
Other DBs
NCBI-ProteinID:
ATC81430
UniProt:
A0ACA8DTK6
LinkDB
All DBs
Position
I:887827..889152
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AA seq
441 aa
AA seq
DB search
MAQIFKAKKKPLKQQTLTLNITAMDHQGRGVAKHNNKVCFVSGALMNEKVTASLIEDKAK
YSSAKLVKVINPSGARTQPFCQHYNHCGGCQLQHLEINQQVVEKQNAVTQLFQKFAKLSD
LNWQAPLLSKPTHYRRSARIAVMYDKAAKKMRVGYRAPSSKNVISIEQCDVLSETFTNVF
SIFETLINQYKALHSISHLQLCQNEAGNFIVIRHTKAIPDEAKSYVQEAAHAQQWLITWQ
DNSDVIEQTHLPTPYYFLEKFNLKFEFGLGNFIQVNDEVNQAMLAQSVNWLNLQGNEQVL
DLFCGIGNFSLVLAQHAKSVIGVEGVASAVAMATQNAQTNSITNAHFHCFDLTQKIETAQ
WFNKALDVLVLDPSRTGAMAVLEQLPLKQFKTILYVSCDPVTLARDSAIISQAGFKVTKI
GLMNMFPHTGHIETMALFQRR
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaatttttaaagcaaagaaaaaaccacttaaacagcaaacactcacacttaat
attacggccatggatcatcaagggcggggcgttgccaaacacaataataaagtgtgcttt
gtaagcggcgctttaatgaatgaaaaagtaacggcaagcctaatagaagataaagccaag
tacagtagcgcaaagctggttaaggttattaatccaagcggtgcgcgcacgcagcctttt
tgtcagcattataatcactgtggtggttgccagttgcagcacctagaaataaatcagcaa
gtggttgaaaagcaaaatgcagtgacgcaactgtttcaaaaatttgccaaattaagcgac
ttaaattggcaagcgcctcttttaagtaagcccactcattacagacgcagtgcccgtatt
gccgtaatgtatgataaagccgctaaaaaaatgcgagttgggtatcgtgcgcctagctct
aaaaatgtgattagtattgagcaatgtgatgtgcttagtgagacatttactaacgtattt
agtatttttgaaacgcttattaatcaatataaagcgctacacagtataagtcatttacag
ttgtgccaaaatgaggctgggaactttatagttattcgccatactaaagcgataccagat
gaagccaaaagctacgtacaagaagcagcacacgcacagcagtggttaattacctggcaa
gacaacagtgatgttatagagcagactcatttgcctacgccgtattattttttagaaaag
tttaatttaaaattcgaatttggccttggtaattttattcaagtaaatgatgaagttaac
caagctatgttagctcagtcggtaaattggcttaacttgcaaggaaacgagcaagtattg
gatttattttgtggtattggtaacttttcattagtgctagcccagcatgctaaatcggtt
attggagtagaaggggttgcatcggcggttgcaatggcgacgcaaaatgcgcaaactaac
tctatcactaatgcgcactttcattgttttgatttaacgcaaaaaattgaaacagcacaa
tggtttaataaggcgctagacgtattagtattagacccttctcgcacaggtgctatggct
gttttagagcaactacctttaaagcagtttaaaaccattttatacgtctcttgcgatcct
gttactttagcccgtgacagtgcaattatttcgcaagcaggctttaaagttactaaaatt
gggctaatgaatatgtttccacatacaggacacatagaaacaatggcgttatttcaacgg
aggtaa
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