Pseudoalteromonas agarivorans: PAGA_a1051
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Entry
PAGA_a1051 CDS
T06137
Symbol
lapB
Name
(GenBank) ATP-binding cassette, subfamily C, bacterial LapB
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
paga
Pseudoalteromonas agarivorans
Pathway
paga02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
paga00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PAGA_a1051 (lapB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
paga02000
]
PAGA_a1051 (lapB)
02044 Secretion system [BR:
paga02044
]
PAGA_a1051 (lapB)
Transporters [BR:
paga02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
PAGA_a1051 (lapB)
Secretion system [BR:
paga02044
]
Type I secretion system
Adhesin protein transporter
PAGA_a1051 (lapB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
Peptidase_C39
AAA_13
AAA_29
DUF87
AAA_23
Motif
Other DBs
NCBI-ProteinID:
ATC81523
LinkDB
All DBs
Position
I:complement(980892..983030)
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AA seq
712 aa
AA seq
DB search
MELNDVLDHGGALVDCLAVLCRFHDKDFSREALLNGLPLTDGNLTPSGFARAAKRVGFKS
KVVNKPLNQINTALLPAIIILNNNQACVVTAIDNQKQTAQVTYPELTESVVEEDLEQLIE
KSTGLIIYAHPEFMFDERSPVLEKLSKDGWFWGVIKECRALYKDVIISAIALGVLSVAMP
LFVMNVYDRVVPNHATETLWVLAIGILIALTADFVLRLVRSYFVELAASRIDVKVSAVIM
ERVLGMKLKNRPSSAGSFASNIQSFEAVRNFFSSITLVALVDLPFVAIYLIVIAIIGVPL
SLPIIAGALILLSYGIAAHRKLEALSEQTMKASSMRNSILVESLTNIEDVKSFHSECKTQ
STWEKSTIYIAQVNAQSRLISSSISNSAAWIQQCVGVIIMIIGVHLVIEGELTQGGLIAA
YLLSSRAMGPLGQCAAVLAQYHHAAIAMQSLNEIMEKDVERPPNKHWLSHPVLNGEIEFK
DVCFKYEDDAADALSNISFKIKAGEKVAILGRNGSGKSTLEKLILGLYDPTAGSVMVDNN
NIQQIDPAELRHNIGYVPQNIALFFGSLKDNLTISAWHAKDEQIISACEKSQLFELINSH
PDGFDLQVGEQGRLLSGGQKQAIGIARALINDPPIMLLDEPTSSLDHNSENKIIQNLKTA
TQDKTLIVVTHRSSLLSLVDRIIVLDNGKIVADGPKQKVIAALNNQTVEQAS
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggaattaaatgatgtacttgatcatggcggcgcactggtagattgccttgcagtattg
tgccgttttcatgataaagatttttcaagggaggccttattaaatggcctcccactaaca
gatggaaacttaacgccttcaggttttgcacgtgctgcaaaacgtgtgggctttaaatca
aaagttgtaaataagcctcttaatcaaattaatactgctttattacccgctattattatt
ttaaataataaccaagcgtgcgtggtaaccgctattgataaccaaaaacaaacagcgcaa
gttacttaccccgagctaactgagtctgttgtagaagaagacctagaacagttaattgaa
aaatcaacaggtttaattatttatgctcatccagagtttatgtttgatgagcgctccccg
gtgcttgaaaagctctctaaagacggctggttttggggcgtaataaaagaatgccgcgca
ctgtacaaagacgtcataatctccgccattgcattaggcgttttgtctgttgccatgcct
ttatttgtaatgaatgtatatgaccgcgtagttccaaatcatgcaacagaaaccctctgg
gttttagccatcggtattttaatagcgctgaccgccgactttgtactgcgcttagtacgc
agctactttgtagagcttgcggcaagtcgtatagatgtaaaagtatctgcggttattatg
gagcgcgtacttggtatgaagcttaaaaataggccctcatcagcggggtcatttgcgagt
aacatacaatcgtttgaagccgtacgtaacttttttagttcaataaccttggtcgcgctg
gttgatttaccctttgttgctatatacctaattgttattgcaataataggtgtaccgctt
agcctacccattatcgcaggtgccctaatacttttaagttatggcatagcagcccacaga
aaacttgaagcgctgtcagagcaaaccatgaaagcaagctcaatgcgcaactccatactt
gtagaaagcttaaccaacattgaagatgtaaaaagttttcacagcgaatgcaaaacccaa
tcaacatgggaaaaatcaactatttatattgctcaggttaatgcgcaaagtcgcttaatc
tcaagttcaatctctaatagtgcagcgtggatacaacaatgtgttggcgtgatcattatg
atcatcggtgttcatttagttattgaaggcgagctcacgcaagggggattaatagccgct
tacttactttcatcgcgggcaatggggccgcttgggcaatgcgccgccgtacttgcgcaa
tatcatcatgccgctattgctatgcaatcgcttaacgaaataatggagaaagacgttgag
cgcccgccaaataaacattggttaagccaccccgtattaaacggcgaaatagaatttaaa
gacgtatgctttaagtatgaagacgacgcggccgatgcgcttagtaatattagctttaaa
ataaaagcgggcgaaaaagtggctattttggggcgcaatggttcgggtaaaagcaccctc
gaaaaacttattttaggcctttacgacccaaccgcaggctccgtaatggtcgataacaac
aatatacaacaaatagaccccgcagaacttcgtcataacatagggtacgtaccccaaaat
atagcgttgttttttggtagtttaaaagacaacctcactattagcgcatggcatgctaaa
gatgagcaaataattagcgcatgcgaaaaaagccagttattcgagttaataaactctcac
cccgatgggtttgacctacaagttggtgagcaaggtcgcttgctatctggcggccaaaaa
caagcaattggtatcgcgcgtgcattaataaacgaccctcctatcatgctgttagatgag
cctacctcatcgcttgatcacaatagtgaaaataaaattattcaaaatttaaaaaccgcc
acccaagacaaaaccttaattgtagttactcaccggtcgtctttactttcgttggtcgat
cgcatcatcgtgctcgataacggaaaaatagttgccgatgggcctaaacaaaaagtaatt
gccgcactgaataaccaaacagtggagcaagcatcatga
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