Pseudoalteromonas agarivorans: PAGA_a1229
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Entry
PAGA_a1229 CDS
T06137
Symbol
truA
Name
(GenBank) tRNA pseudouridine38-40 synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
paga
Pseudoalteromonas agarivorans
Brite
KEGG Orthology (KO) [BR:
paga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
paga03016
]
PAGA_a1229 (truA)
Enzymes [BR:
paga01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
PAGA_a1229 (truA)
Transfer RNA biogenesis [BR:
paga03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PAGA_a1229 (truA)
Prokaryotic type
PAGA_a1229 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Mucin2_WxxW
Motif
Other DBs
NCBI-ProteinID:
ATC81664
LinkDB
All DBs
Position
I:1149187..1149981
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AA seq
264 aa
AA seq
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MRVALGVEYNGARYSGWQRQSHVNSVQQEVEKALSSICNHPVEIVCAGRTDAGVHGTGQV
VHFETHAPREMVAFTMGMNTLLPKDIAIRFAQPVSEDFHARFSATARRYRYVIYNYAYRG
AVMNEGVTHFHHPLDETKMQEACQYLIGEHDFTSFRALHCQANTANRTIHHLSVHRQGDY
VIIDIKANAFLHHMVRNITGCLMDIGLHKHQPIWLKELLDLKERAKASATAKAAGLYLVD
VDYPEHFNIPKTPLGPLFLPDSEC
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgcgagtagcacttggagttgaatacaacggcgcacgttacagtgggtggcaacgtcag
tctcatgtaaatagcgtacaacaagaagtagaaaaagcgttgtcgagcatttgtaatcat
ccggttgaaatagtgtgtgcgggccgcacagatgcaggtgtacatggcactggtcaagtt
gtacactttgaaacccatgctccccgtgagatggttgcatttactatgggaatgaacacg
ttactccctaaagatatagcgattcgttttgcacaacctgttagtgaagactttcatgca
cgctttagcgcaacagcgcgtcgttatcgttatgttatttataattacgcttatagaggc
gcagttatgaatgaaggcgttacgcactttcatcacccacttgatgaaacgaaaatgcaa
gaggcgtgtcagtacttaattggcgagcacgactttacctcttttagagcgctgcattgc
caagctaatacagcaaacagaactattcatcatttatcggtacatcgccagggcgattac
gttattattgatattaaagcgaacgcttttttacaccatatggtgcgaaatattaccggc
tgtttaatggatataggcctacacaagcaccaacctatatggttaaaagagctattagat
ttaaaagaacgtgctaaagccagtgccacagcaaaagccgcgggtctttatttagtagat
gtagattacccagaacactttaatattcctaaaaccccactagggccattatttttacct
gactcggaatgttag
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