Pseudoalteromonas agarivorans: PAGA_a1253
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Entry
PAGA_a1253 CDS
T06137
Symbol
dppD
Name
(GenBank) dipeptide transport system ATP-binding protein
KO
K19229
cationic peptide transport system ATP-binding protein
Organism
paga
Pseudoalteromonas agarivorans
Pathway
paga01503
Cationic antimicrobial peptide (CAMP) resistance
paga02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
paga00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PAGA_a1253 (dppD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
PAGA_a1253 (dppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
paga02000
]
PAGA_a1253 (dppD)
Transporters [BR:
paga02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Cationic peptide transporter
PAGA_a1253 (dppD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
AAA_22
PRK
AAA_29
nSTAND1
CPT
Mg_chelatase
AAA
Motif
Other DBs
NCBI-ProteinID:
ATC81685
LinkDB
All DBs
Position
I:complement(1172423..1173415)
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AA seq
330 aa
AA seq
DB search
MQLLDVRNLTIELRTSETVIRAVDRVSFSLKEGEVHGLVGESGSGKSLIAKAIVGVLNER
WHITADRMHWRGVDLMRLTPEQRRKTVSQDIAMIYQDPSRCLDPTAKIFDQIAETLPETS
TKGFFLKRNRERKDRVKALIHKVGIKNHDAVLDSYPHELSEGVCQKVMIAMAIARTPKLL
IADEPTTALESTTRAQVFRLLKSLNQLKNMSILMISHELEEIADWSHGIHVLYCGQMVEA
GPTQRIFRQPRHPYTQALLKSLPNYEQGLAHKEPFYALKGTIPTLQHLPIGCRLGPRCPQ
AQKECVITPALTKHHGHSYACHFPLIKEMK
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcaattactcgacgttagaaatttaaccatagagctgcgtacctctgaaacggtgatt
cgcgctgtagacagagtcagctttagcctaaaagaaggcgaagtacatggcttggtgggt
gagtcgggctcaggtaaaagcttaatagccaaagccattgttggggtacttaacgaacgc
tggcatataacagccgatagaatgcattggcgcggtgttgatttaatgcgcttaacccca
gagcaacgaagaaaaacagtcagccaagacattgcgatgatttaccaagaccctagccgc
tgccttgacccaaccgctaaaatatttgaccaaatagccgaaacactgcctgaaacatcc
actaaaggcttttttttaaagcgcaatagagaacgtaaagaccgcgtaaaagcacttatc
cataaagtgggtattaaaaaccacgatgctgtgcttgatagttacccgcacgagctctca
gaaggcgtgtgccaaaaggtcatgattgccatggccatagcgcgcactcctaagctacta
attgctgatgagccgactacagcgcttgaaagcaccacccgtgcacaggtatttaggttg
ctaaaaagcttaaatcaattaaaaaatatgtctattttgatgatttctcatgagcttgaa
gaaatagccgactggtcgcacggtattcatgttttatattgtgggcaaatggttgaagcc
ggccctacacaacgtatttttcgccagcctcgccacccttacacgcaagcgttattaaaa
agcttacccaattatgagcaaggcttagcacacaaagaacccttttatgcacttaaaggc
actatccctactttgcaacatttacctataggttgtcgattaggcccacgctgccctcaa
gcacaaaaagaatgtgtaattacccctgcacttactaagcaccatgggcacagctatgcg
tgtcattttccgcttattaaggagatgaagtaa
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