Pseudoalteromonas agarivorans: PAGA_a1346
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Entry
PAGA_a1346 CDS
T06137
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase)
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
paga
Pseudoalteromonas agarivorans
Pathway
paga00541
Biosynthesis of various nucleotide sugars
paga01100
Metabolic pathways
paga01250
Biosynthesis of nucleotide sugars
Module
paga_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
paga00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PAGA_a1346 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
paga01005
]
PAGA_a1346 (kdsA)
Enzymes [BR:
paga01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
PAGA_a1346 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
paga01005
]
Lipid A
PAGA_a1346 (kdsA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
LNYV_PP_C
Motif
Other DBs
NCBI-ProteinID:
ATC81767
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Position
I:1268890..1269744
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AA seq
284 aa
AA seq
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MNNQVININNIELANDKPFVLFGGMNVLESRDLAMRIAEHYVEVTYKLNIPYVFKASFDK
ANRSSINSYRGPGMEEGLKIFEEIKNTFNIPLITDVHEPHQAAPVAEVVDVIQLPAFLAR
QTDLVVAMAKTGAIINVKKPQFLAPHEMRHIITKFNEAGNDNVALCERGSSFGYNNLVVD
MLGMDDMKAMAPVIFDATHALQRPGGRADSADGRRAQAAELARSGMALGIAGLFIEAHPN
PNEAKCDGPCALALSKLEGYLSQMKAVDDLIKSFAPLDTSASDL
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaccaagtaattaatattaataatattgagctggcaaacgacaaaccatttgta
ttatttggtggtatgaatgttttagagtcgcgcgatttagcaatgcgcattgcagagcac
tatgtagaagtaacgtataaattaaatattccttatgtatttaaagcctcgtttgataaa
gcgaatcgctcatcaataaattcataccgcggccctggtatggaagaaggcttaaaaata
tttgaagagattaaaaatacctttaacattccgcttataaccgatgtgcacgaaccacac
caagcagcgcctgttgctgaagtggttgatgtaattcagttacctgcatttttagcacgc
caaaccgatttagtggtagctatggctaaaacgggtgccattattaatgtgaaaaaacca
cagtttttagcgccgcacgaaatgcgccatatcattactaaatttaatgaagcaggtaat
gataatgtggcactgtgtgagcgcggctcaagctttggctacaacaacttagttgttgat
atgctaggtatggatgacatgaaagccatggcgccggttatttttgatgccacccatgca
ctacagcgcccaggtgggcgagctgactctgctgatggacgccgtgcacaagctgccgag
cttgctcgcagcggcatggcattgggcattgcgggcctatttattgaggctcaccctaac
cctaatgaagcaaagtgtgatggtccatgtgcattggcacttagcaagcttgaagggtac
ttatcgcaaatgaaagcggtagatgatttaattaaaagctttgcaccacttgatacaagc
gcaagcgatttataa
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