Pseudoalteromonas agarivorans: PAGA_a1521
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Entry
PAGA_a1521 CDS
T06137
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
paga
Pseudoalteromonas agarivorans
Pathway
paga03030
DNA replication
paga03430
Mismatch repair
paga03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PAGA_a1521 (dnaX)
03430 Mismatch repair
PAGA_a1521 (dnaX)
03440 Homologous recombination
PAGA_a1521 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paga03032
]
PAGA_a1521 (dnaX)
03400 DNA repair and recombination proteins [BR:
paga03400
]
PAGA_a1521 (dnaX)
Enzymes [BR:
paga01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PAGA_a1521 (dnaX)
DNA replication proteins [BR:
paga03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PAGA_a1521 (dnaX)
DNA repair and recombination proteins [BR:
paga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PAGA_a1521 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_tau_5
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_14
AAA_5
AAA_18
AAA_assoc_2
AAA_30
AAA_16
TIP49
AAA_7
AAA_2
RCF1-5-like_lid
AAA_19
PIF1
TsaE
Rad17
nSTAND3
Mg_chelatase
AAA_24
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ATC81918
LinkDB
All DBs
Position
I:1434581..1437049
Genome browser
AA seq
822 aa
AA seq
DB search
MSYQVLARKWRPQTFHELVGQSHVKQALVNALTQNRLHHAYLFTGTRGVGKTTIARIFAK
SLNCDEGISASPCGQCSSCTDIEAGRYIDLLEIDAASRTKVEDTREILDNVQYAPTRGRY
KVYLIDEVHMLSKHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFNLNALSQ
SEIKTQLEHVLTQEELNFDKDALSIIAKAADGSMRDALSLTDQAIAQTNGDINNQAVQAM
LGLMDTHYSQSLLAALLAQDGGALMDEIAQVASRNPNYIALLDDLIALTHLIQLTQLVPQ
AAQLDDKNADYISHVAQHTQAQQIQVYYQLLLNGKKDLQWAPEPRLGFEMIMLRLLAFES
AGTMSAQSLPEPSDTTSAAMPAPTSSKGRADALRDILNKNKTPSQDETPALQVMVEKSQN
QSTAQSQTIDEPVEQPPTEQLTRSPSEQHSNSASAAAQSPQNDIPSPVQQSEHIAKSDDA
AERQSEDDAYLQHSNMEQSLAAQFDDVMSSAVDQGYNPAPVAQHTQPVPENADAKDSSVR
EQEAQAQSAIARILRDRNISGAGRLSGGSVNTPEQAQTPKTPAQATPNSEAKPHNTSPQA
SESQNDSPPWHDNAQGDSEKKPTLPVTGSQTPAEPVTQSQPARKVDFKEKHQTITENLAP
ELLEQINPQKKPEVIEQEPAIPVPDDFQSPISEIKFAHQQDEWAYLIKRMGLGGRMRQFA
LHSIFTKQGDSLHIDVDESQKHLDTPMLRQKLDAALSSIYGHNVSLSINFAKGVIDSPYL
IQQKIDAGRHQQAIDVITSDENIVQFQQLFSAEIDENSIQAL
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttctagcgagaaaatggcgtccgcaaacctttcatgaattggttggc
cagtctcatgtaaagcaagcgcttgttaatgcgctaacgcaaaatagactgcatcacgct
tatttattcactggaacccgtggtgtgggtaaaacgaccattgcgcgtatttttgctaaa
agcttaaattgtgatgagggtatatcggcatctccttgcgggcaatgtagcagttgtact
gatatagaagcagggcgatacattgacttacttgaaatcgatgctgcttctcgcaccaaa
gtagaagatactcgtgaaattcttgataacgttcaatatgcacccacgcgtggacgttac
aaagtatacctaatagatgaagtacacatgctctctaagcatagctttaacgcgttatta
aaaacgttagaagagccgccagagcatgtgaaatttttactagcaaccaccgatccgcaa
aagctacctgttaccatcttatcgcgctgtttacagtttaacttaaatgcactttcgcaa
agcgaaattaaaactcagcttgagcatgtccttactcaagaggagttaaactttgataaa
gatgcgctaagtattattgcaaaagccgccgatggcagtatgcgtgacgcgttgagctta
acagatcaagctattgcgcaaaccaacggcgacataaataatcaagccgtacaagctatg
cttggtttaatggacacacattacagccaaagtttgcttgctgctttgttagcacaagat
ggtggcgcactgatggacgaaatagcccaagtagcgagccgtaatcctaactatattgca
ctacttgatgatttaattgcattaactcaccttattcaattaactcagcttgtcccgcaa
gcagcgcaacttgatgataaaaacgccgattatattagccatgttgcacagcacacccag
gctcaacaaatacaggtttattaccagttactattaaacggtaaaaaagacttacaatgg
gcgccagagcctcgtttaggctttgaaatgataatgctgcgtttattagcatttgagtct
gcaggtacaatgtctgctcaatcgcttcctgagcctagtgacacaacgagtgcagcaatg
cctgcgcctaccagtagtaaaggccgtgccgatgcgctgcgtgatatattaaataaaaat
aaaacaccatcgcaagacgaaacccctgctctgcaagtaatggttgagaaaagccaaaac
caaagcactgcgcaaagccaaacaattgatgaaccagtagagcaaccgcccacagagcag
ctaacacgctcgccaagtgagcaacacagcaacagcgcatcagctgcggctcaaagcccg
caaaacgatataccgagccctgtgcagcaaagtgagcacattgctaagagtgacgatgct
gctgagcgccaaagtgaagacgatgcttatctgcaacacagtaatatggagcaaagctta
gctgcacaatttgatgatgttatgagcagtgcggtagatcaaggttataaccctgcacct
gtagcgcaacatacacaacccgtgcctgaaaacgccgatgctaaagatagcagtgtgcgt
gaacaagaagctcaagcacaatcagcaattgcgcgaattttacgggatagaaatatatcg
ggggcaggcagactttctggggggagtgtaaatacccctgagcaagcgcaaacaccaaaa
acacctgcccaagctacgcctaacagcgaagcaaagccacataatacaagcccgcaagcg
agtgagtcacaaaacgattcaccgccatggcatgacaatgcgcaaggcgatagcgaaaaa
aagccaacgctcccagtaacagggagccaaacgccagctgagccagtaacgcaaagccag
ccagcgcgtaaggttgattttaaagaaaagcatcaaacaattactgaaaacttagcgcct
gagctgcttgagcaaattaacccgcaaaaaaagcctgaggtaatagagcaagagcccgct
ataccggttcctgatgattttcaaagcccaattagcgagattaaatttgcgcatcagcaa
gatgagtgggcttatttaattaagcgtatggggcttggtgggcgaatgcgccaatttgca
ttacactcgatttttactaagcaaggcgacagtttacatattgacgtggatgaatcgcaa
aaacacttagatacgcccatgcttaggcaaaagctcgatgcggcgttatcaagtatatac
gggcataacgtatcgctgagtattaactttgcaaaaggggtgattgactcgccttattta
attcagcaaaaaatagatgcagggcgtcatcagcaagcaatagatgtgatcacatctgat
gaaaacatagtacaatttcagcagctatttagcgccgaaattgacgaaaacagtattcag
gcattgtaa
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