Pseudoalteromonas agarivorans: PAGA_a2139
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Entry
PAGA_a2139 CDS
T06137
Symbol
ybaO
Name
(GenBank) Lrp/AsnC family transcriptional regulator
KO
K05800
Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
Organism
paga
Pseudoalteromonas agarivorans
Brite
KEGG Orthology (KO) [BR:
paga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paga03000
]
PAGA_a2139 (ybaO)
Transcription factors [BR:
paga03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
PAGA_a2139 (ybaO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_24
HTH_AsnC-type
AsnC_trans_reg
HTH_11
MarR
HTH_27
HTH_34
HTH_5
NirdL-like_HTH
HTH_IclR
HTH_Crp_2
Rrf2
HTH_20
MarR_2
HTH_1
HTH_39
FaeA
Sigma70_r4
LexA_DNA_bind
TrmB
HTH_23
HTH_DeoR
wHTH-PRTase_assc
Fe_dep_repress
DUF7343
HTH_6
HTH_CodY
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
ATC82456
LinkDB
All DBs
Position
I:complement(2013919..2014377)
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AA seq
152 aa
AA seq
DB search
MSLNHVDRQILALLQQDASLSTAEIADKVGLSQSPCWRRIAKLEQDGYIKSKVALLDEKK
LGFDMLVYAHVRLSNHGKKNLAEFEKLIMSYDEVTECYTMAGTMDFMLRIISQGIEGYEH
FVRDNLLSLEYVQEVHSNVTMTCVKRSTSLPL
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
atgtctctaaatcacgtagatcgccaaattttggcacttttacaacaggacgcaagtctt
tcaactgctgaaattgcagacaaagtaggcttatctcaatcaccttgttggcgacgcatt
gcaaagcttgaacaagatggctatatcaaaagtaaagttgcgcttttagatgagaaaaag
cttggttttgacatgcttgtatacgcacatgtgcgcttatcaaatcatggcaagaaaaac
ttagctgaatttgaaaagctaattatgagctatgacgaagtgacagaatgttacacaatg
gccggcaccatggactttatgctgcgtattatctcacaaggtatagaaggctatgagcac
tttgtacgtgacaatttactcagcttagaatacgttcaagaggtacactctaacgtaacc
atgacatgtgtaaaacgcagtacatctcttcctctataa
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