Pseudoalteromonas agarivorans: PAGA_a2407
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Entry
PAGA_a2407 CDS
T06137
Name
(GenBank) hypothetical protein
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
paga
Pseudoalteromonas agarivorans
Brite
KEGG Orthology (KO) [BR:
paga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paga03000
]
PAGA_a2407
Transcription factors [BR:
paga03000
]
Prokaryotic type
Helix-turn-helix
Other families
PAGA_a2407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS
PAS_9
AAA_5
PAS_4
Mg_chelatase
AAA
HTH_8
MCM
PAS_3
AAA_3
AAA_16
AAA_2
TIP49
PAS_7
AAA_7
PAS_8
AAA_19
AAA_22
bpMoxR
nSTAND3
Spectrin_SESTD1
Motif
Other DBs
NCBI-ProteinID:
ATC82683
LinkDB
All DBs
Position
I:complement(2275850..2277268)
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AA seq
472 aa
AA seq
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MIKQFLNDPKLLLNAVGEGIYGFDLSGNAVFVNPAAERMTGWKAQELLGKKIHQYHHHSH
ADGSPYPADECQIYCTMFDGKRREVKNEVFWRKDGTSFAVEYTSTPVYRQGELIGAVAVF
RDISAQQQTQNELKQALEQVKHLSEQLQDENNYLIAELNEDWQDSGLVGQSHVFQAMLAQ
IKLVSETDSTVLILGENGTGKELVARNLHRLSKRSNQAFIKVNCAAFTPSLLESELFGHE
RGAFTGANERRKGRFELADKGTLFLDEVAELPLEAQSKLLRVLQEQEFERVGGSTTLKVN
IRVLAATNRDLWQMVQKGTFRIDLYYRLNVFPIKVPALKERKEDIPYLCTNLITQLNKRL
AKQIKGVSKKAISQLQAYDWPGNIRELQNVLEREAILTKHTVLKLSQPLHGDASTAVNTS
LTLAEAQKQHIIAVLELSQWQISGDKGAACKLGLPESTLRSKMRKLGISKNT
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgataaaacaatttttaaatgaccccaaacttttacttaatgcggtaggagagggcatt
tacggctttgatttatcgggcaatgcggtgtttgtaaacccagccgctgaacgtatgact
ggctggaaagcccaagaattgttgggcaaaaaaatacatcagtatcatcatcacagccac
gccgacggctctccttatccagccgatgaatgccaaatatattgcaccatgtttgatggc
aaacgccgcgaggttaaaaacgaagtattttggcgcaaagacggcacctcgtttgcagta
gaatacacatcaacccccgtttacaggcaaggtgagttaattggtgcggtcgcggtattt
cgcgatatatcggcgcagcagcaaacccaaaacgaacttaagcaagcgcttgagcaagtt
aagcatttaagtgagcagctgcaagatgaaaataactacctaattgcagagcttaacgaa
gactggcaagactcaggtttagttggccaaagccatgtttttcaagctatgttggcgcaa
attaaacttgttagcgaaaccgacagcacagtattaattttaggtgaaaatggaacgggc
aaagagctggtggcgcgtaacttacaccggttaagtaagcgcagtaatcaagcatttata
aaagtgaactgcgcagcgtttacgccaagcttgttggagtctgaattatttggccacgag
cgcggtgcgtttaccggtgcaaacgagcgacgtaaaggccgctttgaactggccgacaaa
ggcacactgtttttagacgaagttgctgagctgccattagaagcgcaaagtaaattgcta
agggtattacaagagcaagagtttgaacgggttggcggcagtactacgcttaaggtaaat
attagagtattggcagcaaccaaccgcgacttatggcaaatggtgcaaaaaggcaccttt
cgaattgatttatattaccgccttaatgtgtttcctattaaagtgcctgcgcttaaagag
cgcaaagaagacattccttatttatgcaccaatttaattactcaactaaataaacgctta
gcaaagcaaataaaaggggtgagtaaaaaagcgattagccaactacaagcttatgattgg
cctggtaatattcgcgagttacaaaacgtactagagcgcgaagctattttaactaaacat
actgtccttaaacttagtcagccattgcatggcgatgcaagcacagctgtaaatacatca
cttacgcttgcagaggcgcaaaaacagcacattattgcggtgcttgaattatcacagtgg
caaatatctggcgataaaggcgctgcttgcaaattaggcctgcccgagagcactttgcgc
tcaaaaatgcgcaaactaggaataagcaaaaatacgtga
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