Pseudoalteromonas agarivorans: PAGA_a2479
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Entry
PAGA_a2479 CDS
T06137
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
paga
Pseudoalteromonas agarivorans
Pathway
paga03030
DNA replication
paga03430
Mismatch repair
paga03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PAGA_a2479 (dnaQ)
03430 Mismatch repair
PAGA_a2479 (dnaQ)
03440 Homologous recombination
PAGA_a2479 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paga03032
]
PAGA_a2479 (dnaQ)
03400 DNA repair and recombination proteins [BR:
paga03400
]
PAGA_a2479 (dnaQ)
Enzymes [BR:
paga01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PAGA_a2479 (dnaQ)
DNA replication proteins [BR:
paga03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PAGA_a2479 (dnaQ)
DNA repair and recombination proteins [BR:
paga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PAGA_a2479 (dnaQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
vATP-synt_AC39
Motif
Other DBs
NCBI-ProteinID:
ATC82748
UniProt:
A0ACA8DXQ1
LinkDB
All DBs
Position
I:complement(2354359..2355072)
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AA seq
237 aa
AA seq
DB search
MARRQIVLDTETTGIDPKQGHRIIEIGCVELINRRLTGNNFHVYINPQRSIEEEAIDVHG
ITSEFLRDKPLYRDIAQEFFDYIKGAELVIHNAPFDVGHMDNEFALLNQGYPNTHEYCQV
LDTLKMARDLHPGQKNNLDALCRRYDIDNAKRTLHGALLDSEILADVYLAMTGGQTKLNL
NQNKDDGSEQQTGGIRRLSSDRAPLVVLRANDAEQSAHEARLDLIDKEGGHCLWRAE
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtagacaaatagttttagatacagaaaccaccggcatcgaccccaaacagggg
caccggattatagaaattgggtgtgtagaattaataaaccgacgtttaaccggtaataat
tttcatgtttacattaacccacaacgcagcattgaagaagaagcaatagatgttcacggt
attaccagcgagtttttacgtgataaaccgctttatcgcgatatagcgcaagagtttttt
gactacattaaaggtgcagagcttgtaatacataacgccccgttcgatgtgggccatatg
gataacgagtttgcgctgcttaaccaaggctacccaaatacgcacgagtactgccaagtt
ctcgacacccttaaaatggcgcgtgacttgcatcctggtcaaaagaacaacctagatgct
ttgtgccgccgttacgatatagacaacgcaaaacgaacattacacggcgcattactggat
tctgaaattttagccgatgtttacttagccatgacaggcgggcaaaccaagctaaactta
aaccaaaataaagatgacggcagcgagcaacagactggtggcataagacgcttaagtagt
gaccgagcacctttagttgtattgcgcgcaaacgacgctgagcaaagcgcacacgaagca
cgactcgatcttatagacaaagaaggcggccactgtttatggcgcgctgaataa
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