Pseudoalteromonas agarivorans: PAGA_a2563
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Entry
PAGA_a2563 CDS
T06137
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
paga
Pseudoalteromonas agarivorans
Pathway
paga03030
DNA replication
paga03430
Mismatch repair
paga03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PAGA_a2563 (holA)
03430 Mismatch repair
PAGA_a2563 (holA)
03440 Homologous recombination
PAGA_a2563 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paga03032
]
PAGA_a2563 (holA)
03400 DNA repair and recombination proteins [BR:
paga03400
]
PAGA_a2563 (holA)
Enzymes [BR:
paga01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PAGA_a2563 (holA)
DNA replication proteins [BR:
paga03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PAGA_a2563 (holA)
DNA repair and recombination proteins [BR:
paga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PAGA_a2563 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
ATC82825
LinkDB
All DBs
Position
I:2443385..2444422
Genome browser
AA seq
345 aa
AA seq
DB search
MRCYANQLPSELNKGLKPFYLVFGEEPFQEAQCVQQIRDTAKAQGFDEVIKFTLMQGFDW
QEIIAQYQSMSLFSARTIIELDLNQQKPGTPGSNTFKKIVELINPDTILIVKGAKASQDV
QRGAWFKALDKHGVFVPCYPLAGNHLKRWLDEQVARLSLNMQNEAKLSLINATEGNLLAC
FQELEKLSLLHGNALITQQLVMQGLLNQAKFDIFDLSDALLNGHAKQAIKVLNKLASDNT
EVVSILWAINKELTSLLTIQQGLLNGEPIAQLFKKNGIWKNQQGPVQNAINRLNINTLEQ
ISSELALFDSSYKQGNLIAPYQALAHICIKFCQPLDIPMPCHALN
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgcgctgttatgctaatcagttaccgagtgaattaaataaaggtttaaaacccttttat
ttagtgtttggtgaggaaccgtttcaagaagcgcaatgtgtgcagcaaatacgcgacacg
gcaaaagcccaaggctttgatgaggtaattaaatttaccctaatgcaagggtttgattgg
caagaaattatagctcaatatcaaagcatgtctttgtttagtgcgcgcactataattgag
cttgatttaaaccaacaaaaacctggcaccccaggaagtaatacctttaaaaaaatagtc
gagttaattaaccctgataccattttaattgtaaaaggggctaaagccagccaagacgta
caacgtggcgcttggtttaaagcgctcgataaacacggtgtatttgtaccgtgctacccg
cttgcagggaatcatttaaaacgctggttagatgaacaagtagcgcgcctttctctaaat
atgcaaaacgaagcaaaactgagcttaattaacgctaccgaaggcaatttattagcgtgt
tttcaggagctcgaaaagctctcgctactgcatggtaatgccttaataacccagcaactc
gtgatgcaagggctattaaatcaagccaagtttgatatttttgacttaagtgatgcccta
ttaaatggccacgccaagcaagcaattaaggtacttaataaactggccagcgataacacc
gaagtggtgagtattttatgggctataaataaagagctcaccagtttgctcactattcag
caagggcttttaaatggcgagcctatcgcacagttatttaaaaaaaatggtatttggaaa
aaccagcaaggcccagtgcaaaatgcaattaaccgcttaaatattaatacccttgagcaa
ataagcagtgagcttgcactgtttgattcaagctacaaacaaggtaacttaattgcgcct
taccaagcgcttgcccatatttgtattaagttttgccagccgcttgatattccaatgcct
tgccacgcacttaactaa
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