Pseudoalteromonas agarivorans: PAGA_a2610
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Entry
PAGA_a2610 CDS
T06137
Symbol
truB
Name
(GenBank) tRNA pseudouridine55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
paga
Pseudoalteromonas agarivorans
Brite
KEGG Orthology (KO) [BR:
paga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
paga03016
]
PAGA_a2610 (truB)
Enzymes [BR:
paga01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PAGA_a2610 (truB)
Transfer RNA biogenesis [BR:
paga03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PAGA_a2610 (truB)
Prokaryotic type
PAGA_a2610 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ATC82865
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All DBs
Position
I:complement(2482785..2483729)
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AA seq
314 aa
AA seq
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MARRSKGRPIDGILLLNKPQGISSNKALQQAKGIYFAQKAGHTGALDPLATGMLPICFGE
ATKFTQFLLDTDKTYVVRAKLGERTTTSDSDGEVVETRDVNVTTEQLAAEIEKFLGESDQ
YPSMYSALKYEGKPLYKYAREGIEVPRKCRKINVFSLTLDEFDEANNEVQMTAHVSKGTY
IRTIVDDLGENLGCGAHVIMLHRSAVGHYPKDKMVSLEHLETLLAKAKEEEVAPSTYLDE
LLLPMDSALVDLPVVEISKEQGVSFSHGQAVVLGTDLPEGAIKVLADGVFIGTGERNPDG
HLKSKRGLSNQQPE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggcaagacgcagtaaaggccgtccgattgatggtattttgttgttaaacaaacctcaa
ggcatttcatcgaacaaagccctacagcaagctaaaggtatttactttgcccaaaaagct
ggccataccggtgcgctagacccactggccactggcatgctgcctatttgctttggtgaa
gcgaccaagtttacccaatttttgctcgatacagataaaacctatgtggtaagagcaaag
ctaggtgagcgcacaactacctctgattcagatggcgaagtggttgaaacccgtgatgta
aacgttaccactgaacagttagctgcagaaattgaaaagtttttaggcgagtcagatcag
tatccatcaatgtactcagcgcttaaatatgaaggtaagcctttatataaatacgcgcgt
gaaggcattgaagtaccgcgtaaatgccgaaaaataaacgtgtttagcttaacgcttgat
gagtttgatgaagcaaataacgaagtacaaatgaccgcccatgtatctaaagggacctac
attcgtactattgttgatgatttaggtgaaaacctaggctgtggcgcacatgttattatg
ctgcatcgctcagcagttggccattaccctaaagataaaatggtatcgcttgagcacctt
gaaaccttattagccaaggctaaagaagaagaggtggccccttctacataccttgatgaa
ttactattgccaatggatagtgcattagttgatttacccgttgtagaaattagcaaagag
cagggtgtttcgtttagccatgggcaagcagtcgtattaggcactgatttacccgaaggg
gcaattaaagttcttgctgatggtgtgtttattggcaccggtgagcgcaaccctgacggg
catttaaaatcaaagcgtggcttgtctaatcagcaacccgagtaa
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