KEGG   Pseudoalteromonas agarivorans: PAGA_a3289
Entry
PAGA_a3289        CDS       T06137                                 
Symbol
ddl
Name
(GenBank) D-alanine-D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
paga  Pseudoalteromonas agarivorans
Pathway
paga00470  D-Amino acid metabolism
paga00550  Peptidoglycan biosynthesis
paga01100  Metabolic pathways
paga01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:paga00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    PAGA_a3289 (ddl)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    PAGA_a3289 (ddl)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    PAGA_a3289 (ddl)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:paga01011]
    PAGA_a3289 (ddl)
Enzymes [BR:paga01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     PAGA_a3289 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:paga01011]
 Precursor biosynthesis
  Amino acid ligase
   PAGA_a3289 (ddl)
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N CPSase_L_D2 ATP-grasp_3 ATP-grasp_4 RimK GARS_A ATP-grasp
Other DBs
NCBI-ProteinID: ATC83452
LinkDB
Position
I:complement(3112323..3113243)
AA seq 306 aa
MTQENAQFGKVAVLLGGNSAEREVSLRSGQAVLNALQNAGVDAIAFDPQSRSLWELKELQ
VDRVFIALHGRGGEDGTVQGALEFMNLPYTGSTVLGSALAMDKVRCKHLFKSAGLSTAPY
AVVDAKKGFDAKAIMDEFKKVMVKPSHEGSSIGMAQASTAQELEDALTHAFKFDSQVLVE
QWITGREFTVTVLGDEVQPVIEMTTPNGFYDYQAKYQSNTTQYHCPADLSAQDTQHLQAI
SLEAFDLVGASGWGRVDAMQDEQGNFYLLEVNTVPGMTEKSLVPMAAKANGATFEQLVVR
ILGQTL
NT seq 921 nt   +upstreamnt  +downstreamnt
atgacgcaagaaaacgcgcaatttggtaaagtagcagtactgcttgggggtaactcagca
gagcgcgaagtgtcactacgttcagggcaagcggtgcttaatgcactacaaaatgccggc
gttgatgccattgcttttgacccgcaaagtcgctctttgtgggagctaaaagaattacag
gtcgatcgtgtttttattgctttgcatggccgtggtggcgaagatgggacagtgcaaggc
gcacttgaatttatgaacttgccatacacgggcagcactgtattaggctcagccttggca
atggataaagtacgttgtaagcacttatttaaatctgcagggctaagtacagcgccttat
gcagttgttgatgctaaaaaaggctttgatgcaaaagctattatggatgagtttaaaaaa
gtaatggttaagccatcgcacgaaggctcaagcataggtatggcgcaagcaagtaccgct
caagagcttgaagatgctcttacacatgcttttaagtttgatagccaagtgttagtagag
cagtggataaccggacgcgaatttaccgtgacggtattaggcgatgaagtacagcctgtg
attgaaatgacgactccaaatggtttttacgattaccaagctaagtatcaatcaaataca
acacagtatcattgccctgcagatttatcggcgcaagatacacagcacttacaggctatc
tcgttagaggcgtttgatttagtgggtgcaagcggctggggccgtgtagatgccatgcaa
gatgagcaggggaatttttatttattagaagtaaatacagtccctggcatgaccgaaaaa
tcgctggtgcccatggcggcaaaagcaaatggggcaacatttgagcaattagttgttcgc
attttggggcaaacgctttaa

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