Pseudoalteromonas agarivorans: PAGA_a3294
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Entry
PAGA_a3294 CDS
T06137
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
paga
Pseudoalteromonas agarivorans
Pathway
paga00470
D-Amino acid metabolism
paga00550
Peptidoglycan biosynthesis
paga01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
paga00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PAGA_a3294 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PAGA_a3294 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
paga01011
]
PAGA_a3294 (murD)
Enzymes [BR:
paga01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
PAGA_a3294 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
paga01011
]
Precursor biosynthesis
Amino acid ligase
PAGA_a3294 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
ATC83456
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Position
I:complement(3116937..3118271)
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AA seq
444 aa
AA seq
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MQYLNEIKNKHITVLGLGVTGLGIVRFLLSHGFAPKVVDSRVAPPGMDWLSEHAPELNTH
FGDLASAALCKTDMIIISPGLSLKIPAIAQAIESGIEVIGDVELFARINTKPVVAVTGSN
GKSTVVTLAYEVLKAAGYKVALGGNIGTAVLDLLSDDFDMYVLELSSFQLDTCSSLKPLS
AAVLNISEDHLDRYDSYQAYIDSKLSIYNNAELLVTNADDIQTKPISRALAPQMSFGTDH
GDYHLAERNNELHFIVKGEAYLPVSTLAVVGKHNYLNTLAVMALLSPFDISKEQYAAALC
QFNGLAHRCQFVDEQHGVQYFNDSKATNVGATIAAIDSLASDHENLIVIAGGDAKGADLS
ALKPYIKSHVKALVCFGKDAAELAALTSKSHLVNTMQEAVSLSKVLSKRGDIVLLAPACA
SIDMYNNYMQRGDDFVQCVMEGQL
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgcagtatttaaacgagataaaaaacaaacatataacagtgctcggactcggtgtaacc
ggtctgggcattgtgcgttttttattatctcatggttttgcaccaaaggtcgttgatagc
cgggttgcgccaccaggtatggattggcttagcgagcatgctcctgagcttaatacgcat
tttggtgatttagctagcgccgcgctttgtaaaaccgacatgatcatcataagccccggg
cttagcttaaaaattcccgcaattgctcaagcaatagagtcaggcattgaagtaattggt
gatgtagagctgtttgctcgtataaatacaaaaccggttgttgctgttacaggctctaat
ggtaaatcaaccgttgttaccttggcctacgaggtattaaaagcagcaggttataaggtg
gcattaggtggcaatattggcactgcggtattggatttattaagtgatgattttgacatg
tatgtgctggagctttcgagttttcagctagatacctgctcaagcttaaaaccattaagc
gcagcggtattaaatatatctgaagatcatttagatcgttacgacagctaccaagcctat
atcgactctaaattaagcatttataacaatgctgagcttttagtaaccaacgcagatgat
attcaaactaagcctattagtcgtgctttagcgccgcaaatgagctttggcaccgaccac
ggtgattatcacttagctgagcgcaataatgagctgcactttatagtaaaaggcgaggcg
tacttacctgttagcacgcttgcggtcgttggtaagcacaattacttaaatacacttgcg
gttatggcgttattaagcccgtttgatattagtaaagaacagtacgcagcggcgctttgt
caatttaatggtttagcgcaccgttgccagtttgttgatgagcaacatggtgttcaatac
tttaacgactctaaagccaccaatgttggcgccactatagcggcaatagatagtttggcc
tcagatcacgaaaacctgattgttatagccggtggtgatgctaaaggcgctgatttaagt
gcgttaaagccatatataaaaagtcatgtaaaagcgcttgtatgctttggtaaagatgca
gcagagcttgctgctttaacgagtaaatcgcacttagtaaacacaatgcaagaggcggta
tcgctctctaaagtacttagcaagcgcggtgacattgtattacttgcccctgcctgtgcc
agcattgatatgtataacaactacatgcaacgcggtgatgactttgtgcaatgtgtaatg
gaagggcaattatga
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