Pseudoalteromonas agarivorans: PAGA_a3297
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Entry
PAGA_a3297 CDS
T06137
Symbol
murF
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
paga
Pseudoalteromonas agarivorans
Pathway
paga00300
Lysine biosynthesis
paga00550
Peptidoglycan biosynthesis
paga01100
Metabolic pathways
paga01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
paga00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PAGA_a3297 (murF)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PAGA_a3297 (murF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PAGA_a3297 (murF)
Enzymes [BR:
paga01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
PAGA_a3297 (murF)
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
ATC83458
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Position
I:complement(3119354..3120736)
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AA seq
460 aa
AA seq
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MIPMDFDWLANVLATDYLGDNLNVVNINTDTRSICDGEVFLALKGPNFDGHKFIADAKQK
GAIGVIVQHKVDVDIVQFVVSDTRIALGNIGAAVMAQVNPKTIAITGSVGKTTVKEMCAA
ILSVHGDVLATKGNFNNDIGVPLTLLRLEPQHRFAVIELGANHLGEIAYTTAMAKPDVAV
VCNVAAAHLEGFGSLMGVAKAKGEIFDGLKDDGVAIVNCDSEFSQYWLDKLKGRTVKCFS
STEKLDIWAENISLDENARASFLLCTQDQKVPVTLALPGKHNVSNALIAAALTSEFEVSL
EEIATALATMGDVKGRVNLIKVTDSLTVIDDTYNANVKSVKAAIDLLSDIQGHRILALGD
MGELGEQARTYHQEVGEYAKQQGIDELYTLGVLSKYASDVFDKPNRHFSNREEMLKQIQT
SLNNTNNKTTLVVKGSRSSRMELLVTDLVNGQQQAINGVS
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgatcccaatggactttgattggctggcaaatgtgctagcaaccgattatctaggtgat
aatctcaatgtagtaaatattaataccgatacccgcagcatttgcgacggtgaggtgttt
ttagctttaaaagggcctaattttgatggccataaatttattgctgatgctaaacaaaaa
ggcgctattggcgttattgttcagcataaagtagatgttgatattgtgcagtttgttgtt
agcgatacccgtattgcattaggcaatataggtgcggcagttatggcgcaggttaaccct
aaaaccattgctattacgggcagcgtgggtaaaacaacggtaaaagaaatgtgcgccgct
attttatcggtgcacggagatgtgcttgctacaaaaggtaattttaataacgatattggc
gtaccgcttacgctattacgtttagagccgcagcaccgttttgctgttatagagcttggc
gctaatcatttaggcgaaattgcttacactaccgccatggcaaaacccgatgtagctgtg
gtgtgtaatgtggccgctgcgcatttagaaggctttggtagtctaatgggagttgctaag
gcaaaaggtgagatttttgatggcctaaaagacgatggcgttgccattgttaactgcgat
agcgaatttagccaatactggcttgataaattaaaagggcgcactgttaagtgtttttca
agtactgaaaaacttgatatttgggctgaaaatatcagcctggacgaaaacgctcgcgcg
agctttttattgtgtacacaagatcaaaaagtaccagtaacgcttgctcttcctggtaag
cacaatgtgagcaatgcgcttattgccgcagctttaaccagcgagtttgaggtatcactt
gaagagatagccaccgcacttgccaccatgggcgatgttaaggggcgtgtaaacttaata
aaagtaactgattcactgaccgttattgatgatacctacaatgcaaatgttaagtcggta
aaagcagcaattgatttattaagtgatattcaagggcaccgtattttagcactgggcgat
atgggagagcttggtgagcaagccagaacttatcatcaagaagtaggcgaatacgcaaaa
caacaaggtatcgatgaactgtatacgctgggtgtgttaagtaaatacgcaagcgatgta
tttgataagccaaaccgtcatttttctaaccgagaagagatgctcaagcaaattcaaacc
agtcttaataacacaaacaataaaaccacgcttgtggtgaaaggatcgcgcagttctcgc
atggaattattagtaaccgatttagtaaatggccagcaacaagccatcaatggagtatca
taa
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