Pseudoalteromonas agarivorans: PAGA_a3360
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Entry
PAGA_a3360 CDS
T06137
Symbol
yhbJ
Name
(GenBank) UPF0042 nucleotide-binding protein
KO
K06958
RNase adapter protein RapZ
Organism
paga
Pseudoalteromonas agarivorans
Brite
KEGG Orthology (KO) [BR:
paga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paga03019
]
PAGA_a3360 (yhbJ)
Messenger RNA biogenesis [BR:
paga03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PAGA_a3360 (yhbJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_22
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
ATC83511
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All DBs
Position
I:3168929..3169774
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AA seq
281 aa
AA seq
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MELIIISGRSGSGKSVALRVVEDLGYYCVDNIPVNLLPSLVRSVSDNYDKIAVSIDVRNI
PKEQDEFNDILECLPDFAKPTLFYLDSDDQTLIKRFSETRRLHPLSIDSLPLDLAIKKEK
ELLDVLVTRADFMLDTTDLSVHQLAESIREKILGKKDKQLIVTFESFGFKHGIPKEADYV
FDARFLPNPHWEPELKPLTGLDQPVKDFLANHSIVQKFTWQIQTFVQTWLPHLERNNRSY
LTIAIGCTGGQHRSVYLAQAIGESFAMTHPNVKIRHREQEK
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggagttaattatcataagcggccgttctggttcaggtaagtcggttgctttacgcgtg
gttgaagatttaggctattattgcgtagataatattccggtcaacttactgccctcttta
gtgcgaagtgtttcagataactatgacaaaatagccgttagtatagatgttcgtaatatc
cccaaagaacaagacgaatttaacgatattctcgagtgccttcctgactttgctaaaccc
acactgttttatttagatagtgatgatcaaacattgatcaaacgtttttcagaaacacgc
agactacaccctttatccatcgattcgctgccgcttgatttagcaattaaaaaagaaaaa
gaactgctagatgtacttgtaacgcgcgctgactttatgcttgatactaccgatttaagt
gtgcaccaattagcagagtcaattcgcgaaaaaatactgggtaaaaaagataagcaactt
attgtaacgtttgaatcatttggctttaaacacggcatacctaaagaagctgattatgtt
tttgatgctcgctttttgccaaaccctcactgggagcctgaacttaaaccgcttacgggc
cttgatcaaccagtaaaagattttttggcaaatcacagcatagtgcaaaaattcacttgg
caaattcaaacctttgtacaaacttggttgccacacttagagcgtaataaccgtagttac
ctcactattgcaattggctgtactggtggtcaacaccgctcggtttatttagcgcaagcc
attggtgagagctttgctatgacgcatccgaatgtcaaaattcgtcatcgtgagcaagaa
aagtaa
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