KEGG   Pseudoalteromonas agarivorans: PAGA_a3412
Entry
PAGA_a3412        CDS       T06137                                 
Symbol
pdhD
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
paga  Pseudoalteromonas agarivorans
Pathway
paga00010  Glycolysis / Gluconeogenesis
paga00020  Citrate cycle (TCA cycle)
paga00260  Glycine, serine and threonine metabolism
paga00280  Valine, leucine and isoleucine degradation
paga00310  Lysine degradation
paga00380  Tryptophan metabolism
paga00620  Pyruvate metabolism
paga00630  Glyoxylate and dicarboxylate metabolism
paga00640  Propanoate metabolism
paga00670  One carbon pool by folate
paga00785  Lipoic acid metabolism
paga01100  Metabolic pathways
paga01110  Biosynthesis of secondary metabolites
paga01120  Microbial metabolism in diverse environments
paga01200  Carbon metabolism
paga01210  2-Oxocarboxylic acid metabolism
paga01240  Biosynthesis of cofactors
Module
paga_M00009  Citrate cycle (TCA cycle, Krebs cycle)
paga_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
paga_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
paga_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
paga_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:paga00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    PAGA_a3412 (pdhD)
   00020 Citrate cycle (TCA cycle)
    PAGA_a3412 (pdhD)
   00620 Pyruvate metabolism
    PAGA_a3412 (pdhD)
   00630 Glyoxylate and dicarboxylate metabolism
    PAGA_a3412 (pdhD)
   00640 Propanoate metabolism
    PAGA_a3412 (pdhD)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    PAGA_a3412 (pdhD)
   00280 Valine, leucine and isoleucine degradation
    PAGA_a3412 (pdhD)
   00310 Lysine degradation
    PAGA_a3412 (pdhD)
   00380 Tryptophan metabolism
    PAGA_a3412 (pdhD)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    PAGA_a3412 (pdhD)
   00670 One carbon pool by folate
    PAGA_a3412 (pdhD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:paga04147]
    PAGA_a3412 (pdhD)
Enzymes [BR:paga01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     PAGA_a3412 (pdhD)
Exosome [BR:paga04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   PAGA_a3412 (pdhD)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored NAD_binding_8 GIDA AlaDh_PNT_C HI0933_like FAD_binding_2 Thi4 Pyr_redox_3 DAO FAD_binding_3 Trp_halogenase
Other DBs
NCBI-ProteinID: ATC83553
LinkDB
Position
I:complement(3217795..3219222)
AA seq 475 aa
MSNELKTQVVVLGGGPGGYSAAFRAADLGLEVTLVESRETLGGVCLNVGCIPSKALLHVA
KVIDDAAEMSSHGVTFGAPQIDLDKIRSWKESVVGQLTGGLDGMAKMRKVKVVPGYGKFT
GSNTLDVEGADGTTTITFDNAIIAAGSKPVSLPFIPEDDRVIDSTGALELKDVPEKLLVL
GGGIIGLEMGTVYRALGSDIDVVEFADQLVPAADKDIIKIYQKYVNKKFNVMLSTKVVGV
EAKDDGLYVTFEGKNAPAEPVRYDKVLVAVGRTPNGNLLDADKAGVNVDERGFINVDKQL
RTNVDHIFAIGDLVGQPMLAHKAVHEGHVAAEVISGQKHFFDPKCIPSIAYTDPEIAWVG
VTEKEAKEQGLSIETAVFPWAASGRAIASARTEGSTKLIFDKDSGRVIGGAMVGINAGEM
LGEIGLAVEMGADGEDLALTIHAHPTLNESIGLAAEIFEGSITDLPNKKAVKKKK
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgagcaacgaattaaaaactcaagttgttgtactaggcggtggtcctggtggttactct
gcggctttccgcgctgctgacttgggcttagaagttacattagtagaatcgcgtgaaaca
ttaggcggcgtatgtcttaatgttggttgtattccttcaaaagcacttttacacgtggct
aaagtgattgatgacgctgcagaaatgtcatctcacggtgttacttttggcgctccgcaa
attgatttagacaaaattcgctcttggaaagagtcggttgttggccagcttacaggtggc
ttagacggcatggctaagatgcgtaaagttaaagttgtaccaggttacggtaaattcact
ggcagcaacactttagacgttgaaggtgctgacggcactacaactattacatttgataac
gcaatcattgctgcgggttctaaacctgttagcttaccgttcatcccagaagatgaccgt
gtaattgattcaactggcgcattagaacttaaagacgtaccagagaaactacttgtttta
ggtggtggtattatcggtcttgaaatgggtacggtttaccgcgcactaggttctgatatt
gatgtagttgaatttgcagatcagttagttccggctgcggataaagatatcatcaagatt
taccaaaaatacgtaaacaaaaaattcaatgttatgctttctactaaagttgttggcgtt
gaagcgaaagatgatggcttatacgttacttttgaaggcaaaaacgcaccagctgagcca
gtacgttacgacaaagtacttgttgctgtaggccgtacgcctaacggtaacttacttgat
gctgataaagcaggtgttaatgttgatgagcgtggctttattaatgttgataagcaatta
cgtactaacgtagaccatatttttgcaattggtgatttagttggccaacctatgcttgcg
cataaagcggtacacgaaggccatgttgctgcagaagttatctctggtcagaagcacttc
ttcgaccctaaatgtattccttcaattgcctacactgatccagaaatcgcatgggtaggt
gtgactgagaaagaagcaaaagagcaaggcttaagcattgaaactgcggtattcccgtgg
gctgcatcaggtcgcgcaattgcatctgctcgtactgaaggttctactaagcttatcttt
gataaagacagtggccgtgtaatcggtggtgctatggtgggtattaacgcaggcgaaatg
cttggcgaaatcggcttagcagttgaaatgggcgcagacggtgaagacttagcgcttact
attcatgctcacccaacattgaacgagtctattggccttgcagctgagatttttgaaggt
tcaatcactgatttaccaaacaaaaaagcggttaaaaagaagaagtaa

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