Pseudoalteromonas agarivorans: PAGA_a3450
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Entry
PAGA_a3450 CDS
T06137
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma-32 factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
paga
Pseudoalteromonas agarivorans
Brite
KEGG Orthology (KO) [BR:
paga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paga03021
]
PAGA_a3450 (rpoH)
Transcription machinery [BR:
paga03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PAGA_a3450 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
GntR
Motif
Other DBs
NCBI-ProteinID:
ATC83583
LinkDB
All DBs
Position
I:complement(3250120..3250983)
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AA seq
287 aa
AA seq
DB search
MSKDLYAMALTVGQQSASMDGYLQAVSTIPMLKAEQEKELATRLQEEGDLSAAKQLIMSH
LRFVAHIAKSYSGYGLPQADLIQEGNIGLMKAVKRFDPSVGVRLVSFAVHWIKAEIHEFV
LKNWRIVKVATTKAQRKLFFNLRKNKKRLGWFNQAEVSTVANELGVSEKEVREMESRMSG
QDMGFDLTGDDNDDAPTSTYSPVQYLTDGSADLADDIEQQQWQEQSHTRLFSALKTLDER
SQDIVSARWLSDDKATLQELAEKYSVSAERVRQLEKTAMKKLQSAMS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagatttatacgcaatggcacttacagttgggcaacaaagcgcaagcatggac
ggctaccttcaagcggttagcacaattcctatgcttaaagctgagcaagagaaagagcta
gcaacacgacttcaagaagaaggcgatcttagtgctgcaaagcaactcattatgtcgcat
ttacgctttgtagcacatattgctaaaagctactcgggttatggtttaccgcaagccgac
ttaatccaagagggcaatataggcctgatgaaagcggttaagcgtttcgacccaagtgtg
ggtgtacgtttagtgtctttcgctgttcattggattaaagcagaaattcatgagtttgtg
ctcaaaaactggcgcatcgtaaaagttgcgaccactaaagcgcaacgtaaattgtttttt
aatcttcgtaaaaacaaaaaacgtttaggttggtttaaccaagctgaagtaagcactgta
gcgaatgagctaggtgtgagtgaaaaagaagttcgtgaaatggaatcgcgcatgagcggc
caagacatgggctttgacttaacgggcgacgataacgacgacgcgccaacaagtacatat
tcaccagtacaatatttaacagacggctcagctgatttagctgacgatattgagcagcaa
caatggcaagagcagtcacatactcgtttatttagcgcgcttaaaacgctagacgaacgc
tcacaagacattgtaagtgcacgctggttgtctgatgacaaagcaacactacaagagctt
gctgaaaaatacagtgtatctgctgagcgtgttcgccagctagaaaaaacagcgatgaaa
aagctgcaaagtgctatgagctaa
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