Pseudoalteromonas agarivorans: PAGA_a3552
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Entry
PAGA_a3552 CDS
T06137
Name
(GenBank) putative spermidine/putrescine transport system substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
paga
Pseudoalteromonas agarivorans
Pathway
paga02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
paga00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PAGA_a3552
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
paga02000
]
PAGA_a3552
Transporters [BR:
paga02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PAGA_a3552
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
ATC83667
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All DBs
Position
I:3338081..3339343
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AA seq
420 aa
AA seq
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MDTPKRTTLKKLAVLGLTAGVVTHVPYVFARKKVTLRVLGTHVTLQEAIRKQAMLDLGIN
IEFSPAGSAAVLQKASMDPGSFDLYEQWSNSINVLWRAGSIQPIEKKRLTYFNEINSLTK
TGKLTPDAKLGAGDAPYKLLNVQEDGTLSANESDYISFLPYVHNVDSFGYNTAKIKPGIA
YETESWGWLLDDAHRGKVGIVNAPTIGLFDLALAAQSKGLITFKDIGAITRSELDRLFSI
LIDYKRQGHFAGYWNSVPESVEFMKSQRVHIESMFSPAVAALNSQNVNVRFAAPKEGYRG
WHGVMCLSSQVNNNQKDAAYDYMNWWLSGWAGAFIARQGYYISNPQRSKAMLSPSEWDYW
YLGKPTTVDLLNTQKQVAVKAGEQRNGGSYLKRLSNVAVWNSVMPTYDYSLQKWYELISR
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggatacccctaaacgcaccacattaaaaaagctcgctgtcctcggtttaaccgcgggc
gtagttactcatgtaccttatgtgtttgcccgaaaaaaagtaaccctaagagtcttagga
acacatgtcacgctacaagaagccattcgtaaacaagcaatgcttgatttaggcataaat
atagaattttcccctgcaggtagtgctgccgtattacaaaaagcctccatggaccctggc
tcatttgatttatacgagcaatggtcaaacagtattaatgtgctttggcgggcggggtct
attcagcccatagaaaaaaaacggctaacctactttaatgaaataaattctctaaccaaa
acggggaagctcacaccggatgcaaaattaggtgcaggcgacgccccttataaattactc
aacgtacaagaggacggcacactaagcgcaaacgaaagcgattacattagctttttgccc
tatgtacataatgttgactcttttggctataacaccgctaagataaaacctggcattgcc
tacgaaactgaaagctggggctggttacttgatgatgcccaccggggtaaagtaggtatt
gtaaatgcgcccacaattggcttatttgaccttgccttggcagcacaaagcaaagggtta
ataacatttaaagatattggtgcgattactcgctccgagcttgaccgtttatttagcatt
ttaattgactataaacgccaagggcattttgcaggttattggaactcggtgccagagtct
gttgaatttatgaaaagccaacgcgtgcacatagaaagtatgttttcccccgctgtggcc
gcgctcaatagtcaaaatgttaacgtgcgatttgccgctccaaaagagggctaccgtggc
tggcatggggtaatgtgcttatcgtcacaggttaataataaccaaaaagatgccgcatac
gattacatgaactggtggctttcgggatgggccggcgcatttattgctcgccaagggtat
tacattagtaatccacagcgttcaaaagcaatgctttcaccaagtgaatgggattactgg
tacttaggcaagcccactacggttgacttactaaacacccaaaaacaagtcgcagtaaaa
gccggcgagcagcgaaatggtggtagctatttaaaacgcttaagcaatgtagctgtttgg
aatagcgttatgccgacttacgattacagcttgcaaaaatggtatgagttaataagcaga
taa
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