Pseudoalteromonas agarivorans: PAGA_a3579
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Entry
PAGA_a3579 CDS
T06137
Symbol
groEL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
paga
Pseudoalteromonas agarivorans
Pathway
paga03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paga00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PAGA_a3579 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paga03019
]
PAGA_a3579 (groEL)
03110 Chaperones and folding catalysts [BR:
paga03110
]
PAGA_a3579 (groEL)
03029 Mitochondrial biogenesis [BR:
paga03029
]
PAGA_a3579 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
paga04147
]
PAGA_a3579 (groEL)
Enzymes [BR:
paga01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PAGA_a3579 (groEL)
Messenger RNA biogenesis [BR:
paga03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PAGA_a3579 (groEL)
Chaperones and folding catalysts [BR:
paga03110
]
Heat shock proteins
HSP60 / Chaperonin
PAGA_a3579 (groEL)
Mitochondrial biogenesis [BR:
paga03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PAGA_a3579 (groEL)
Exosome [BR:
paga04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PAGA_a3579 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
PAGA_a3579 (groEL)
Exosomal proteins of breast cancer cells
PAGA_a3579 (groEL)
Exosomal proteins of colorectal cancer cells
PAGA_a3579 (groEL)
Exosomal proteins of bladder cancer cells
PAGA_a3579 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ATC83691
LinkDB
All DBs
Position
I:3366835..3368484
Genome browser
AA seq
549 aa
AA seq
DB search
MAAKEVLFAGDARAKMLTGVNILANAVKVTLGPKGRNVVLDKSFGSPVITKDGVSVAKEI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGI
DKAIIAAVEELKALSVPCADTKAIAQVGTISANSDKEIGDIIAQAMEKVGRNTGVITVEE
GQSLENELDVVEGMQFDRGYLSPYFINNAEKGAVELDNPFILLVDKKVSNIRELLPTLEA
VAKASKPLLIIAEDLEGEALATLVVNNMRGIVKVSAVKAPGFGDRRKAMLQDIAVLTGGT
VISEEIGLELEKATIEDLGTAKRVVITKDDTTIIDGAGEEDGINGRVAQIKAQIEEATSD
YDKEKLQERMAKLAGGVAVIKVGAATEIEMKEKKDRVEDALHATRAAVEEGVVPGGGVAL
VRAASKLVELLGDNEDQNHGIKVALRAMEAPLRQIVTNAGDEASVVINAVKGGEGNYGYN
AASGEYNDMLEMGILDPTKVTRSALQFAGSIAGLMITTEAMVAEIPKEEAAGAPDMGGMG
GMGGMGGMM
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaagaagtactttttgcaggtgacgcacgcgctaaaatgctaacaggcgta
aatatcctagcaaacgcagtaaaagtgaccttaggtcctaaaggccgtaacgtagtacta
gataaatcatttggctctccagtgatcactaaagatggtgtatctgtagcaaaagaaatc
gaacttgaagacaagtttgaaaacatgggtgcacaaatggtgaaagaagttgcatctaaa
gcaaatgatgcagcgggtgacggtactactaccgcaactgtacttgcgcaatctattgta
aacgaaggtcttaaagcggttgctgcgggtatgaacccaatggatcttaagcgcggtatt
gataaagcaattatcgctgctgtagaagagcttaaagcgctatctgtaccatgtgctgat
actaaagctattgcacaagtaggtactatttcagctaactctgataaagaaattggcgac
atcattgcacaagcaatggaaaaagtaggccgtaacacaggtgttattactgtagaagaa
ggtcaatcactagagaacgaactagatgttgtagaaggcatgcagtttgaccgtggttac
ctatctccgtactttatcaataacgctgaaaaaggcgctgttgagctagacaacccgttc
attctacttgtagataaaaaagtatctaacattcgtgagctactacctacattagaagcc
gttgctaaagcaagcaagccactattaatcattgctgaagacctagaaggcgaagcactt
gcaacgcttgtagttaacaacatgcgcggtattgttaaagtatcagcagttaaagcccct
ggttttggcgaccgtcgtaaagcaatgctacaagatatcgccgtattaactggcggtact
gttatctctgaagaaattggtttagagcttgaaaaagcaactatcgaagacctaggtact
gctaagcgtgtagtaatcactaaagatgatacaactatcattgatggtgcgggtgaagaa
gatggcattaacggccgtgttgctcaaattaaagcacagattgaagaagcaacgtctgac
tacgataaagaaaaactacaagagcgtatggctaaacttgccggcggtgttgcagtaatt
aaagtaggcgcagcgactgaaattgaaatgaaagagaaaaaagaccgtgttgaagatgca
ttacatgcaactcgtgcagcggttgaagaaggcgtagtacctggtggtggtgttgctctt
gtacgtgctgctagcaagctagttgagctacttggcgacaacgaagatcaaaaccacggt
attaaagttgcacttcgtgcaatggaagcaccacttcgtcaaatcgtaacaaatgcaggc
gacgaagcgtcagtagtaataaacgctgttaaaggcggcgaaggtaactacggttacaac
gcagcctctggcgaatacaacgacatgcttgaaatgggtatcctagatccaactaaagta
acgcgctctgcactacaatttgcaggttcgattgcgggtctaatgatcactaccgaagca
atggttgctgaaatccctaaagaagaagctgctggtgcccctgatatgggtggcatgggc
ggaatgggtggcatgggcggcatgatgtaa
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