Pseudoalteromonas agarivorans: PAGA_a3794
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Entry
PAGA_a3794 CDS
T06137
Name
(GenBank) hypothetical protein
KO
K20918
LuxR family transcriptional regulator, positive regulator of biofilm formation
Organism
paga
Pseudoalteromonas agarivorans
Brite
KEGG Orthology (KO) [BR:
paga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paga03000
]
PAGA_a3794
Transcription factors [BR:
paga03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
PAGA_a3794
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
Sigma70_r4_2
VpsT-like_REC
HTH_23
HTH_40
Sigma70_r4
HTH_10
HTH_24
HTH_5
HTH_7
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
ATC83878
LinkDB
All DBs
Position
I:3565096..3565752
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AA seq
218 aa
AA seq
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MSSSAFLLLDQEPINTIGINVLEPLLKTQGLDVTTGTNILDVPEGTRLLFIETSSNDAWG
KLKEQLVNLRTKCDIVLFNLDENPELANRALLSGIRGVFYTTDNADVLMKGIRLLLEDQL
WYRRDIMCNALNRMLQFNKDALHKLTEGDIEPIKLTKREKAIISLMSKGSKNKEIAEDLS
ISPHTVKTHLYSAFRKTKCRNRIELLSWAQQNIPDEIR
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgagcagttcagcctttttgttattagatcaagagccaattaacaccattggcattaac
gttttagaacctttgttaaaaacgcaaggccttgacgtaaccacgggtacaaatatttta
gatgtaccagaagggactcgattactgttcattgaaacatcaagtaacgatgcatggggt
aaactaaaagaacagctagttaacctgcgcaccaagtgcgatatcgtattatttaaccta
gacgaaaacccagagctcgctaaccgcgcgctgttgagcggtattcgtggcgtgttttat
acgacagataacgctgatgtattaatgaaaggtattcgcttacttttagaagatcagctt
tggtacagacgtgacattatgtgtaatgcattaaaccgcatgctgcagtttaataaagac
gcactacacaagctgaccgaaggcgatatagagccaattaaactcactaaacgagaaaaa
gcaataatctcgttaatgagtaagggttctaaaaacaaagaaattgctgaagatttaagc
atcagcccgcacacagttaaaacacatttatacagcgcatttagaaaaactaaatgtcgt
aaccgtattgagctactatcttgggctcaacaaaacattccagacgaaattcgttaa
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