Pseudoalteromonas agarivorans: PAGA_b0016
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Entry
PAGA_b0016 CDS
T06137
Name
(GenBank) hypothetical protein
KO
K21645
LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
Organism
paga
Pseudoalteromonas agarivorans
Brite
KEGG Orthology (KO) [BR:
paga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paga03000
]
PAGA_b0016
Transcription factors [BR:
paga03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PAGA_b0016
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
AsnA
Motif
Other DBs
NCBI-ProteinID:
ATC84002
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Position
II:11977..12861
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AA seq
294 aa
AA seq
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MNIESKWLEDFLTLSHTKSFSQAATLRHITQPAFSRRIKALEDALGAALIDRENLPITLT
PSGKIFHITARNLVNQMNTSVSMLEELSVQQNYSVKVAAAHSLASFLTLQLANFQTQDER
DIVLNLEAIDVDKATEALEQGECDLLIAFDNERLKLPPFSHQKIGNAKLLPVSACDEQGK
ALYNLESAAPIPHLAYSLDSYMGRQLEPIISGAKLKKVFVSSMTELLKVHAVAGNGIAWL
PDYVISNELKNNTLVVVGSEHHCVPITYYAYRYHAALHPGGESVWNKLTELNIS
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgaatattgaaagtaaatggttagaagattttttaacgctctcgcacacaaaaagcttt
tcgcaagcggcaacgcttaggcatattacgcaacctgcatttagtcggcgtataaaagcc
cttgaagacgcccttggcgcagccctaatcgaccgagaaaacttgcctattactcttacc
ccaagcggtaaaatatttcatataacggcgcgtaatttagttaaccaaatgaatacctcg
gttagcatgcttgaggagttgtcagtgcagcaaaattattctgtaaaggtagcggccgca
cattctttagcgagttttttaaccttacaactcgctaactttcaaacgcaagatgagcgc
gacattgtacttaatttagaggctatagacgtagataaagccaccgaagcgctagagcaa
ggtgaatgcgacttacttattgcctttgataacgaacgccttaaactgccgccgtttagt
catcaaaaaataggtaatgctaagttgttacctgttagcgcctgtgacgagcaaggcaaa
gccttatataacctagaaagcgcagcgcctataccgcatttagcctacagtctcgactcc
tacatgggccggcagttagagcctattatatcgggagcaaagcttaaaaaggtgtttgtt
tcatccatgactgagcttttaaaagtgcacgctgttgcaggcaatggtattgcctggctg
cccgactacgttatatcaaacgagcttaaaaataatacattggtagttgtagggagtgag
caccactgcgtgccaataacttactatgcgtatagatatcatgcggctttgcaccccggt
ggcgaaagtgtgtggaataagttaactgagctaaatataagctaa
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