Pseudoalteromonas agarivorans: PAGA_b0262
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Entry
PAGA_b0262 CDS
T06137
Symbol
iciA
Name
(GenBank) LysR family transcriptional regulator, chromosome initiation inhibitor
KO
K05596
LysR family transcriptional regulator, chromosome initiation inhibitor
Organism
paga
Pseudoalteromonas agarivorans
Brite
KEGG Orthology (KO) [BR:
paga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paga03000
]
PAGA_b0262 (iciA)
03036 Chromosome and associated proteins [BR:
paga03036
]
PAGA_b0262 (iciA)
Transcription factors [BR:
paga03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PAGA_b0262 (iciA)
Chromosome and associated proteins [BR:
paga03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
PAGA_b0262 (iciA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_AsnC-type
Hairy_orange
Motif
Other DBs
NCBI-ProteinID:
ATC84205
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Position
II:219819..220718
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AA seq
299 aa
AA seq
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MIDYQLLNALSAVISEGGFEKASKKLFITQSAVSRRIHQLEAKLGEPVLIRTQPPTPTAL
GKRLLNHLQQVLQLEVALNVEALNEHTDLNTPLSVKLAANADSLATWLPEALAVLDTELA
CKLRFEVISEDQSIAHKRMKDGEVMVCISSSPEPVNGGLVSPLGAIRYKAIASPDFIKQH
KLTELSQLAHLPCLVFSEYDKLQHQFLEDINGSAPLFTHIYPSSEGFKQAMIAGLGYGLL
PTLQLGDSLIKGELVDLFPEYYIDTPLYWHYWQTESPQLKTLRKFALQVAGKRLEPINL
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgattgattaccagttactcaatgcgcttagtgccgttataagtgaaggcggatttgaa
aaggcctcaaaaaaattatttattacccaatcggcggtgagtaggcgtattcatcagctt
gaggccaaactaggcgagcccgtattaataagaacccagccgccaacgcccacggcactt
ggtaaacgtttacttaatcatttacagcaagtattacagctagaagtggcccttaatgta
gaggcacttaacgagcacacagatttaaacaccccgcttagcgtaaagcttgctgctaat
gcggattcgcttgccacctggctgcccgaagcactcgccgtattagatacagagcttgcg
tgcaaattacgctttgaagttattagtgaagatcaatccattgcccataaaagaatgaaa
gacggcgaggttatggtgtgtattagctcatcccccgagcccgttaatggcggcctagtt
agcccacttggcgccatacgctacaaagccattgcaagccccgattttataaagcaacat
aagcttactgagctttcgcaattagcgcatttaccgtgcttggtatttagtgagtatgac
aagctacaacaccagtttttagaagatattaatggctcagccccactgtttacccatatt
tacccttcgtcagagggatttaaacaagccatgatagcaggcctaggttatgggctatta
cctaccttacagctaggagactcgctgataaaaggcgagttagtcgatttattcccagaa
tattatattgatacacctttgtattggcactattggcaaaccgaaagcccgcagcttaaa
acgttgcgtaagtttgcattgcaagtagcaggcaaacggttagagcctattaacctataa
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