KEGG   Pseudoalteromonas agarivorans: PAGA_b0312
Entry
PAGA_b0312        CDS       T06137                                 
Symbol
impC
Name
(GenBank) type VI secretion system protein ImpC
  KO
K11900  type VI secretion system protein ImpC
Organism
paga  Pseudoalteromonas agarivorans
Brite
KEGG Orthology (KO) [BR:paga00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:paga02044]
    PAGA_b0312 (impC)
Secretion system [BR:paga02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PAGA_b0312 (impC)
SSDB
Motif
Pfam: VipB VipB_2 Imm6 PAP_RNA-bind Flavi_glycoprot
Other DBs
NCBI-ProteinID: ATC84245
LinkDB
Position
II:260087..261577
AA seq 496 aa
MSAEQLSTELESTAEASSSLLEQAIGATKQTDASRAEELLKTLTEEALKGTVQWNKNMTV
TFNEAIQLIDQKISKQLSVVMHSDEFQKLEGSWRGLHHLVMNSETSSTLKIRVLNMKKKE
LHKDLSKAVEFDQSQTFKKIYESEFGTPGGEPYGTIVGDYEFTNHPEDVETLSLMSNVAA
AGFCPFIAASSPSLFGFDNWEELTKPRDLEKVFESLEYTKWRSFRDSDDSRFVSLTMPRF
LSRLPYGAASKPVEEFNYEEFEVEPKAGRSVSTENSDYCWSNAAYAMATNMTKAFSQYGF
CTAIRGAEGGGKVEGLPTHIFTSDDGDPDLKCPTEIGITDRREAELSKLGFLPLCHYKNT
DYAVFFGGQSCQKPQVYSTPDATANAAISARLPYLMATSRFAHYLKVMARDKIGSFMEAE
DVESWLNRWILSYVNATEGGGQDIRARYPLADAKVSVKEIPGQPGAYNAVAWLRPWLQME
ELTSSLRLVAKIPEIG
NT seq 1491 nt   +upstreamnt  +downstreamnt
atgagtgcagagcaactaagtactgaattagagtcaacagctgaggcaagttcatcgtta
ttggagcaagcaattggtgctactaagcaaactgatgcaagtcgcgcagaagagcttctt
aaaacgttaactgaagaggcattaaaaggcacagttcaatggaataaaaacatgactgtg
acatttaatgaagcaattcaattaattgatcaaaaaatatcaaaacagcttagtgttgtc
atgcatagcgatgagtttcaaaagctagaaggttcttggcgtgggttacaccaccttgta
atgaattctgaaacgagctcaacgcttaaaattcgtgttttaaacatgaagaaaaaagaa
ttgcataaagatttgagtaaagcagttgagtttgaccaaagccaaacatttaaaaagatt
tacgaatctgagtttggtacaccaggcggagaaccttatggcacaattgtgggcgactat
gaatttactaaccacccagaagatgttgaaacgttaagcttaatgtcgaacgtggcagcg
gctggtttctgtccatttattgccgcttcgtcaccttctttattcggctttgataactgg
gaagagttaactaaacctcgagatttagaaaaagtgtttgaatcattagagtacacaaag
tggcgctcgttcagagacagcgatgattcacgttttgtatcgttaactatgcctcgcttc
ttatcacgtttaccttatggtgcagcttctaaacctgtagaagagtttaactatgaagag
tttgaagttgaaccaaaagcagggcgctcagtaagtaccgaaaatagtgactactgctgg
agtaatgcagcttacgcaatggccactaatatgaccaaggcgttttcacaatacggtttt
tgtactgcgattcgtggtgctgagggtggcggtaaagttgaaggcttaccaacgcatatt
ttcacaagtgatgatggtgatccggatcttaaatgcccaacggaaattggcataacagac
cgtcgtgaagcagagcttagtaaacttggtttcttacctttatgtcactacaagaatact
gattacgctgttttctttggtgggcaaagctgtcaaaaaccacaagtatattcaacgcct
gatgcaacagctaatgctgcaatttcagcacgcttaccttatttaatggcaacatctcgt
tttgcacattacttaaaagtgatggcgcgtgataaaattggtagctttatggaagcagaa
gatgttgagtcatggctaaatcgttggattttatcatacgtaaatgcgacagagggtggt
ggtcaagatatcagagcacgctacccgttagccgatgcgaaagtatcagttaaagaaata
ccaggtcagccaggtgcttataacgcagtggcatggttaagaccttggctacaaatggaa
gaacttacttcttcattacgccttgtagctaaaattccagagattggttaa

DBGET integrated database retrieval system