Pseudoalteromonas agarivorans: PAGA_b0806
Help
Entry
PAGA_b0806 CDS
T06137
Symbol
treX
Name
(GenBank) glycogen operon protein
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
paga
Pseudoalteromonas agarivorans
Pathway
paga00500
Starch and sucrose metabolism
paga01100
Metabolic pathways
paga01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
paga00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
PAGA_b0806 (treX)
Enzymes [BR:
paga01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
PAGA_b0806 (treX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
ISOA1-3_C
Isoamylase_C
GlgX_C
Motif
Other DBs
NCBI-ProteinID:
ATC84656
LinkDB
All DBs
Position
II:697951..700014
Genome browser
AA seq
687 aa
AA seq
DB search
MSNRFEVSHGQPHPLGASISSGGVNFSLYAPKATQAYVCLFDKSGHSEILKVTMHINEGG
IWTAHVAPLAEGALYGYRVEGEYSPEKGLLFNEHKLLIDPYAKDLFGEFTWSERHYGQMP
IGTKSTVNNAIDIPKSRVINSQPYKHKKPNHSWSNTVIYECHVKGATCRHPNIPKNLQGK
FLGLSHPSFIEHLHNLGVTALELLPVHAFISEQFLTAKGLQNYWGYNTLNFFTPHKDYLV
DDDINEFKRMVSELHKADIEVILDVVYNHTAEAGADGPILSLRGLDNLAYYRTVADKPQV
YINDTGCGNTINIDHPKTLKLVLDSLRYWVQVMGVDGFRFDLATILGRNTHGFNSAHAFF
QAIEQDPVLSRVKLISEPWDIGPGGYQLGVFAAPWREWNDQYRDVIRRFWQSEEGVIANV
AKRIHGSFDIFEHSQRGPLNSINFITSHDGFTLADLVSYEHKHNEANGEQNRDGHSANHS
TNCGVEGFTNDAKIIALRLQQQKNFLLTLILSKGVPMIASGSEMGHSQGGNNNAYCQNNR
TSWLAWKDSQLNHSLTRFIDDALKIRRGHSAFKHSVFSEDIDERFTVKWFTEQGVKMTNE
HWHEPQRQFLMYSLLDKQNKYALLIILNASKKTVFCKLPPSPIAAQWDMVLSSVHNASVS
SKEDAIVEISAQSSWVFSANLEDDGHV
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatcgatttgaggtttcacatgggcaaccacatccacttggcgcatctattagc
agtggcggcgttaactttagcttgtacgcacctaaagcaacacaagcttatgtgtgttta
tttgataaaagtgggcactctgaaatattaaaagtaaccatgcatattaacgaaggcggt
atatggacagcccatgtagcgcccttagccgaaggcgcattatatggttatcgcgtagaa
ggggagtacagccctgaaaaaggtctgctgtttaacgagcacaagttgctgattgaccct
tatgcaaaagacttatttggcgaattcacatggagtgagcgccactatgggcaaatgcct
attggcacgaaaagcaccgttaataatgccattgatatacctaaatcacgggttattaat
agccagccttataaacataaaaagccaaaccatagctggtctaataccgttatttatgag
tgccatgtaaaaggcgccacgtgccgacaccctaatatccctaaaaatttacaaggcaag
tttttaggtttaagccaccctagctttattgagcatttacataatttaggggttaccgca
ctagagctgctccctgtgcatgcttttataagtgagcagtttttaacggcaaaggggctg
caaaattattggggctacaacacgctcaacttttttaccccgcataaagattatttagtt
gatgatgacattaacgaatttaagcgcatggttagcgagcttcataaagcggatatagag
gttattttagatgtggtttataaccacaccgcagaagcgggcgccgatgggccgatttta
tcgctcagagggctagataacctagcttattaccgaacggtggctgataagcctcaggtg
tatataaacgatacaggctgcggtaacaccattaatattgatcatcctaaaaccttaaag
ctggtacttgatagcttacgttattgggtgcaagtaatgggagtagacggatttagattt
gatttagccaccattttaggcagaaatacccatggttttaatagcgcccatgcatttttt
caagctattgaacaagaccctgtattaagccgtgtaaagcttattagtgagccctgggat
atagggcctggtggctatcagctaggggtttttgctgcaccttggcgagagtggaatgac
caatacagagatgtaatacgccgattttggcaaagcgaagaaggcgttattgcaaatgtg
gcaaaacgtattcatggctcatttgatatttttgagcacagccagcgcgggccgctaaac
agcattaattttattaccagccatgatggttttacgcttgccgatttagtaagttatgag
cacaaacataacgaagcgaatggcgagcaaaatcgcgatggccacagcgctaatcattcc
accaattgtggtgttgaaggatttactaatgatgccaaaattattgccctaaggctgcag
caacaaaagaactttttacttacgctaatactctcaaaaggggtgcctatgattgcctca
ggcagtgaaatgggtcactcgcaagggggcaataataatgcgtattgtcaaaataaccgc
accagttggttggcatggaaagactcacagctaaatcattcactaacccgatttattgac
gatgcactaaaaataaggcgtggtcacagtgcgtttaaacacagtgtattttcagaagat
atagacgagcgctttacagttaaatggtttaccgagcaaggcgtaaaaatgactaacgag
cattggcacgagccacagcgccagtttttaatgtatagcttgttagataagcaaaataaa
tacgccttattaatcattttaaatgcgagtaaaaaaacagttttttgtaagttaccccca
tcgcctatcgcggcgcaatgggacatggttttatcaagtgtacataacgcatcggtgagt
agtaaagaggatgcaatagtcgaaatttcagcacaaagcagctgggtttttagtgcaaat
ttagaggacgatggtcatgtctaa
DBGET
integrated database retrieval system
