Pseudoalteromonas agarivorans: PAGA_b0889
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Entry
PAGA_b0889 CDS
T06137
Symbol
fadD
Name
(GenBank) long-chain acyl-CoA synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
paga
Pseudoalteromonas agarivorans
Pathway
paga00061
Fatty acid biosynthesis
paga00071
Fatty acid degradation
paga01100
Metabolic pathways
paga01212
Fatty acid metabolism
paga02024
Quorum sensing
paga04146
Peroxisome
Module
paga_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
paga00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PAGA_b0889 (fadD)
00071 Fatty acid degradation
PAGA_b0889 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PAGA_b0889 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
PAGA_b0889 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
paga01004
]
PAGA_b0889 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
paga04147
]
PAGA_b0889 (fadD)
Enzymes [BR:
paga01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PAGA_b0889 (fadD)
Lipid biosynthesis proteins [BR:
paga01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PAGA_b0889 (fadD)
Exosome [BR:
paga04147
]
Exosomal proteins
Exosomal proteins of breast milk
PAGA_b0889 (fadD)
Exosomal proteins of breast cancer cells
PAGA_b0889 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
ATC84726
LinkDB
All DBs
Position
II:773606..775258
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AA seq
550 aa
AA seq
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MEKIWLKRYPEGMPETIDPEHYNSLLEVFEKSFTDYKDLPAFTNMGKTLSYDEIDTATQR
VASYIQNDLGLKKGDKVAVMMPNLLQTPIAILGILRAGCVVVNVNPLYTVRELEHQLKDS
DASAIFILANFADTLEKALAKTDVKHIVVTQVGDMVGGIKKHIVNFVVKYIKKMVPSYNL
PNTIKFSDVLAGDPAKYTRPEMSLSDLAFLQYTGGTTGVSKGAMLSHGNMVGNLEQVSGC
LDKVLDRGTEVVVTALPLYHIFALTANCLTFMKYGGLNVLITNPRDMPAFVKELNQHKFT
AITGVNTLFNGLLNTPGFAELDFSHLKMSLGGGMAVQRPVAEKWQKVTNSKLMEGYGLTE
CAPLVTVSPYDLEAYNGSIGLPAPNTEIKLMLENGEEAAKGEPGELWVKGPQVMLGYYNR
PDATAECLQDGWFATGDIATYDDEGFFYIVDRKKDMIIVSGFNVFPNEIEEVVAMHDGVL
EVAAIGIPHDVSGEQVKVFVVKKDPSLTEKDIINHCRDNLTNYKVPKLVEFKDELPKTNV
GKILRRALKD
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaaaatctggcttaagcgctacccagaaggtatgcctgaaacaatcgatcctgag
cattacaactcgttactcgaagtgttcgaaaaaagttttaccgattacaaagatttacct
gcatttacgaatatgggtaaaacattatcgtatgatgaaatagatacagcgacacaacgt
gttgcctcgtatattcaaaatgatttaggtttgaaaaaaggcgacaaagttgccgtaatg
atgcctaacttgttacaaacgcctatcgctattttaggtattttacgtgcagggtgtgtg
gtggttaacgtaaacccactttacacagtacgagagcttgagcatcaattaaaagactct
gacgcttcagctatttttatattggctaattttgcagacacgcttgaaaaagcacttgca
aaaacggatgtaaaacacattgttgttacccaagtgggcgacatggtgggtggtattaaa
aagcatatcgttaattttgtggttaaatacataaaaaaaatggtacccagctacaacctg
ccaaatacaattaagttttcagatgtgttagcaggtgaccctgcaaagtatacgcgtcca
gaaatgagcttatctgatctggcctttttacaatacacgggtggtacaaccggcgtatct
aaaggggctatgttaagtcatggcaacatggttggtaaccttgagcaagtatcgggctgt
ttagataaagtattagaccgtggtactgaagttgttgttactgcattaccgctttatcat
atatttgcgttaacggctaactgcttaacgtttatgaaatacggtggtttgaatgtatta
atcacaaacccacgtgatatgccagcatttgttaaagagcttaatcagcataaatttact
gctattaccggtgtaaataccctgtttaacgggctacttaatacaccagggtttgcagag
cttgattttagtcatttaaaaatgtcattaggtggcggtatggcggtacaacgtcctgta
gctgaaaaatggcaaaaagtgactaattctaaattaatggaaggttacggtttaactgag
tgtgcaccgcttgtaactgtaagcccgtacgatttagaagcttataatggctctattggt
ttacctgctcctaataccgaaattaagctaatgcttgaaaacggagaagaagcggcaaaa
ggtgaacccggtgagctatgggttaaaggcccacaagttatgctaggttactataaccgc
ccagatgcaaccgcagaatgtttgcaagatggctggtttgctaccggcgatattgccaca
tacgacgatgaaggtttcttctatattgttgaccgcaaaaaagacatgatcattgtatcg
ggctttaatgtgttcccaaatgagatagaagaagtggttgccatgcacgacggcgtacta
gaagtcgcggctattggtattccgcacgatgtaagtggcgaacaagttaaagtttttgtt
gttaaaaaagacccttctttaactgaaaaagatataataaatcactgtcgtgataattta
actaattataaggtgcctaaactcgttgagtttaaggatgagttacctaaaacaaatgta
ggtaaaattctcagaagagccctaaaagattag
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