Pseudomonas agarici: AWM79_00205
Help
Entry
AWM79_00205 CDS
T11104
Name
(GenBank) ATP-dependent RNA helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
pagb Pseudomonas agarici
Brite
KEGG Orthology (KO) [BR:
pagb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pagb03009
]
AWM79_00205
Enzymes [BR:
pagb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AWM79_00205
Ribosome biogenesis [BR:
pagb03009
]
Prokaryotic type
rRNA helicases
AWM79_00205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-ProteinID:
AMB83814
UniProt:
A0A0X8F4V2
LinkDB
All DBs
Position
complement(52388..53773)
Genome browser
AA seq
461 aa
AA seq
DB search
MTTIATAFNSLPLSAAMLANLDSLGYAQMTPIQAQSLPVILKGMDLIAQAKTGSGKTAAF
GIGLLNPINPRFYGCQALVICPTRELADQVAKEIRRLARAEDNIKVLTLCGGVALGPQIA
SLEHGTHIIVGTPGRIQQHLRKGSLVLHGLNTLVLDEADRMLDMGFYDAIEEIIAQLPER
RQTLLFSATYPVSIKQLAAKFMRNPQQVKAEALHADSQIEQRFYEIAPEDRMDAVLKVLN
HFRPASCVAFCFTKQQVQETVDTLTAKGVSAVALHGDLEQRDRDQVLAMFANRSICVLVA
TDVAARGLDIDALDMVINVELARDSQMHIHRVGRTGRAGETGLAISLVAPSESLRARAIE
EVQKSPLNWDQLDNLKSQGGGPLLPAMSTLCIAAGRKDKVRPGDILGALTGDAGIPGAQV
GKIAIFDFQAYVAVERGVAKQALQRLNDGKIKGRSLRVRIL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaccatcgccaccgcttttaactcgttgcccctgtccgctgccatgttggctaac
ctcgactccctcggttacgcccagatgacgccgattcaggcgcagagcttaccggtgatt
ctcaagggcatggatctgatcgcccaggccaagaccggcagcggcaagaccgccgccttc
ggcatcggcctactgaacccgatcaatccgcgcttctatggctgccaagccctggtgatc
tgcccgacccgcgaactcgccgaccaggtcgccaaggaaatccgccgcctggcacgcgcc
gaagacaatatcaaggtgctgactctttgcggcggtgtggccttaggtccgcagatcgct
tcattggaacacggcacgcatatcatcgtcggcaccccagggcgcatccagcagcatctg
cgcaagggctcgctggtcctgcacggcctcaacaccctggtgctcgacgaagccgaccgc
atgctcgacatgggtttctacgacgccatcgaggaaatcatcgcccaacttcccgagcgc
cgacagaccttgttgttctccgccacctacccggtgagcatcaagcagttggccgccaaa
ttcatgcgcaacccacagcaggtcaaggccgaggcactgcatgccgacagccagatcgaa
cagcgcttctacgagattgccccggaagatcgcatggacgcggtgctcaaggtgcttaac
catttccgcccagcctcctgcgtggcgttctgcttcaccaagcagcaggtccaggaaacc
gtcgacaccctgaccgccaagggcgtatccgccgtggccctgcacggcgacctggaacag
cgcgaccgcgatcaagtcctggcgatgttcgccaaccgcagcatctgcgtgctggtggcc
accgacgtggcggcgcgcggcctggatatcgatgcgctggacatggtgatcaacgtcgag
ctggcgcgtgattcgcagatgcatatccaccgcgtcggtcgtaccgggcgggcgggcgag
accggcctggcgatcagcctggtagcgccgtccgaaagcctgcgcgcacgggctatcgag
gaggtgcagaaatcgccgttgaactgggaccagctcgacaacctcaagtcccagggcggc
ggtccgttgctgccggccatgagcaccctgtgcatcgccgccgggcgcaaagacaaggtg
cgtccgggcgatatcctcggcgccctgaccggcgacgctgggattcccggcgcccaagtc
ggcaagatcgcgatcttcgatttccaggcctatgtggcggtagaacgcggtgttgccaag
caggccttgcaacgcctgaacgacggcaagatcaagggtcgctcgctgcgcgtgcggatt
ctctga
DBGET
integrated database retrieval system
