Pseudomonas agarici: AWM79_02590
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Entry
AWM79_02590 CDS
T11104
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
pagb Pseudomonas agarici
Pathway
pagb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pagb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AWM79_02590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pagb03021
]
AWM79_02590
03400 DNA repair and recombination proteins [BR:
pagb03400
]
AWM79_02590
Enzymes [BR:
pagb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AWM79_02590
Transcription machinery [BR:
pagb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AWM79_02590
DNA repair and recombination proteins [BR:
pagb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AWM79_02590
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
AMB84249
UniProt:
A0A0X1SXL9
LinkDB
All DBs
Position
552386..552649
Genome browser
AA seq
87 aa
AA seq
DB search
MARVTVEDCLEHVDNRFELVMLSTKRARQLATGGKEPKVAWENDKPTVVALREIAEGLVS
YEMIANEEIVEDEPLFAAFEDESNEAV
NT seq
264 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgtaaccgttgaagactgcctagaacacgtggataaccgttttgagctggtc
atgctctccaccaagcgtgctcgtcaactggcgaccggtggcaaagagccgaaagtcgcc
tgggaaaacgacaagcctaccgttgtggccctgcgtgaaattgccgaaggcctggtgagc
tacgaaatgatcgccaacgaggagatcgtcgaagacgaacctctgttcgcggcgttcgag
gacgagtccaacgaggccgtctaa
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