Pseudomonas agarici: AWM79_03015
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Entry
AWM79_03015 CDS
T11104
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pagb Pseudomonas agarici
Brite
KEGG Orthology (KO) [BR:
pagb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pagb03400
]
AWM79_03015
Enzymes [BR:
pagb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
AWM79_03015
DNA repair and recombination proteins [BR:
pagb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
AWM79_03015
Prokaryotic type
AWM79_03015
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AMB84324
UniProt:
A0A0X1SWP2
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All DBs
Position
complement(659285..660730)
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AA seq
481 aa
AA seq
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MQLLWLRTDLRLHDNTALTAAARRGPMVAVYLLTPAQWQAHDDAPCKVDFWLRNLQELSQ
VLATLNIPLLIRHADTWDQVPSVLLKLCQDLRVEALHLNEEYGVHESRRDRAVAKAVEAQ
GISCHRYLDQLLFKPGSVLTLTGSYFQIFSQFRKVCYSRLHGALPAMVEAPGAQLPLSVG
SDPIPVEVEGFPTPTQALRDLWPAGEAEARRRLDSFADQQIEHYQSERDFPAKPATSQLS
AYLAAGVISPRQCLHVALRNNQGEFDSGNVGVVTWINELLWREFYKHILVGYPRVSRHRA
FRPETEAVAWRDAPQDLAAWQQARTGLPIIDAAMRQLLETGWMHNRLRMVVAMFLTKNLL
IDWREGERFFMRHLIDGDLAANNGGWQWSSSTGTDSAPYFRIFNPVSQSEKFDSEGLFIK
HWLPELAGLNKKQVHSPPALDGLFGVADYPRPIVDLAKSRARALAAFKNLSSRLDAGGIN
E
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgctttggctgcgcaccgacttgcgcctacatgacaacacagccctgaccgcc
gccgcccggcgcggccccatggtcgcggtgtatctgctgacgcccgcacaatggcaagcc
cacgacgacgccccgtgcaaggtcgacttctggttgcgcaacctgcaggagctgagccaa
gtgctggccacactaaatattcccctgctgattcgccatgccgacacgtgggaccaggtt
ccctcggtcctgctcaagctgtgccaggacctgagagtcgaagccctgcatctcaacgaa
gaatacggcgtgcacgaaagtcgccgcgaccgggccgtggccaaggccgtcgaagcccaa
ggcattagctgccaccgttatctcgatcaattactcttcaaacccggtagcgtgctgacc
ctcaccggcagctatttccaaatcttcagccagttccgcaaggtttgttacagccgcctt
cacggtgcattgccggcaatggtcgaggcccccggagcacagttgccgctgagcgtgggc
agcgacccgattcctgtcgaagtcgagggtttccccacaccgacccaagccctgcgtgac
ctctggcctgcgggagaagccgaggccaggcggcgcctggacagctttgccgaccagcag
atcgagcattaccagagtgagcgggattttccggccaaaccggccaccagccagctatcc
gcctacctcgccgctggcgtgatttcccctcgccagtgcctacacgtcgcgctacgcaat
aatcagggcgaattcgacagtggcaatgtcggcgtcgtcacttggatcaacgagctactc
tggcgcgaattctacaaacatattctggtcggctatccgcgggtctcgcgtcaccgcgct
tttcgcccggaaaccgaagccgtggcctggcgcgatgcgccgcaggatctggcggcctgg
caacaggcgcgtaccggcctgccgatcatcgacgcagccatgcgccaactgctcgagacc
ggctggatgcacaaccgcctgcgcatggtggtggcgatgttcctgaccaagaacctgttg
atcgactggcgcgaaggcgagcgtttttttatgcgccacctgatcgatggggacctggcg
gccaacaacggcggctggcagtggagctcgtccaccggcaccgattcggcgccctatttt
cggatcttcaatccggtcagccagtcggagaaattcgacagcgaaggcttatttatcaag
cactggctgccggaactggcggggctgaacaaaaagcaagtgcacagcccgccggccctc
gacggccttttcggtgtcgctgactatccacggccgatcgtcgacctggcaaaaagtcgc
gcacgtgccctggctgccttcaagaacctgtcatcgcggctggatgccggaggtataaat
gagtga
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