Pseudomonas agarici: AWM79_03750
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Entry
AWM79_03750 CDS
T11104
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pagb Pseudomonas agarici
Pathway
pagb03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pagb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AWM79_03750 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pagb03019
]
AWM79_03750 (rnc)
03009 Ribosome biogenesis [BR:
pagb03009
]
AWM79_03750 (rnc)
03036 Chromosome and associated proteins [BR:
pagb03036
]
AWM79_03750 (rnc)
Enzymes [BR:
pagb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
AWM79_03750 (rnc)
Messenger RNA biogenesis [BR:
pagb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AWM79_03750 (rnc)
Ribosome biogenesis [BR:
pagb03009
]
Eukaryotic type
90S particles
RNase
AWM79_03750 (rnc)
Prokaryotic type
rRNA processing factors
AWM79_03750 (rnc)
Chromosome and associated proteins [BR:
pagb03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
AWM79_03750 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
AMB84468
UniProt:
A0A0X1SXJ2
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All DBs
Position
823486..824175
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AA seq
229 aa
AA seq
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MTVSLSRLERQLGYTFKDQELMVLALTHRSFAGRNNERLEFLGDAILNFVAGEALFDRFP
QAREGQLSRLRARLVKGETLAVLARGFELGDYLRLGSGELKSGGFRRESILADALEALIG
AIYLDAGMDMARERVLAWLTSEFDSLTLVDTNKDPKTRLQEFLQSRACELPRYEVVDIQG
EPHCRMFFVECEITLLNEKSRGQGVSRRIAEQVAAAAALIALGVENGND
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgtgtccttgagccgtctcgagcgtcagctcggctataccttcaaggatcaggag
ctgatggtcctggccctgactcatcgcagttttgccgggcgcaacaacgagcgcctggag
tttctcggtgacgcaattctcaacttcgtggccggtgaggcgctgttcgatcgctttcca
caggcccgtgaaggccagttatcgcgtttgcgcgcacgcctggtaaaaggtgaaacactg
gcggtactggcccgtggtttcgaattgggcgattacctgcgtctgggctccggtgagttg
aagagtggtggttttcgccgtgagtcgatcctggccgatgccctggaagcgctgatcggt
gcgatctatctcgacgcgggcatggacatggcccgcgagcgtgtgctcgcctggttgacc
tcggagttcgacagcctgacgctggtggacaccaacaaagaccccaagacccgtttgcag
gaattcctgcagtcgcgtgcctgtgaactgccgcgctacgaagtggtggatatccagggt
gaaccgcattgccggatgttcttcgtcgaatgcgaaatcactctattgaatgaaaaaagc
cgaggacaaggcgtgagccgtcgtattgccgaacaggtagcggccgctgctgcattgatc
gccctgggcgtggagaatggtaatgactga
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