KEGG   Pseudomonas agarici: AWM79_03750
Entry
AWM79_03750       CDS       T11104                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
pagb  Pseudomonas agarici
Pathway
pagb03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pagb00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    AWM79_03750 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pagb03019]
    AWM79_03750 (rnc)
   03009 Ribosome biogenesis [BR:pagb03009]
    AWM79_03750 (rnc)
   03036 Chromosome and associated proteins [BR:pagb03036]
    AWM79_03750 (rnc)
Enzymes [BR:pagb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     AWM79_03750 (rnc)
Messenger RNA biogenesis [BR:pagb03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     AWM79_03750 (rnc)
Ribosome biogenesis [BR:pagb03009]
 Eukaryotic type
  90S particles
   RNase
    AWM79_03750 (rnc)
 Prokaryotic type
  rRNA processing factors
   AWM79_03750 (rnc)
Chromosome and associated proteins [BR:pagb03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     AWM79_03750 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DSRM_2
Other DBs
NCBI-ProteinID: AMB84468
UniProt: A0A0X1SXJ2
LinkDB
Position
823486..824175
AA seq 229 aa
MTVSLSRLERQLGYTFKDQELMVLALTHRSFAGRNNERLEFLGDAILNFVAGEALFDRFP
QAREGQLSRLRARLVKGETLAVLARGFELGDYLRLGSGELKSGGFRRESILADALEALIG
AIYLDAGMDMARERVLAWLTSEFDSLTLVDTNKDPKTRLQEFLQSRACELPRYEVVDIQG
EPHCRMFFVECEITLLNEKSRGQGVSRRIAEQVAAAAALIALGVENGND
NT seq 690 nt   +upstreamnt  +downstreamnt
gtgaccgtgtccttgagccgtctcgagcgtcagctcggctataccttcaaggatcaggag
ctgatggtcctggccctgactcatcgcagttttgccgggcgcaacaacgagcgcctggag
tttctcggtgacgcaattctcaacttcgtggccggtgaggcgctgttcgatcgctttcca
caggcccgtgaaggccagttatcgcgtttgcgcgcacgcctggtaaaaggtgaaacactg
gcggtactggcccgtggtttcgaattgggcgattacctgcgtctgggctccggtgagttg
aagagtggtggttttcgccgtgagtcgatcctggccgatgccctggaagcgctgatcggt
gcgatctatctcgacgcgggcatggacatggcccgcgagcgtgtgctcgcctggttgacc
tcggagttcgacagcctgacgctggtggacaccaacaaagaccccaagacccgtttgcag
gaattcctgcagtcgcgtgcctgtgaactgccgcgctacgaagtggtggatatccagggt
gaaccgcattgccggatgttcttcgtcgaatgcgaaatcactctattgaatgaaaaaagc
cgaggacaaggcgtgagccgtcgtattgccgaacaggtagcggccgctgctgcattgatc
gccctgggcgtggagaatggtaatgactga

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