KEGG   Pseudomonas agarici: AWM79_03860
Entry
AWM79_03860       CDS       T11104                                 
Name
(GenBank) RNA-binding protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
pagb  Pseudomonas agarici
Pathway
pagb02024  Quorum sensing
pagb03060  Protein export
pagb03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pagb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    AWM79_03860
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AWM79_03860
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    AWM79_03860
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pagb02044]
    AWM79_03860
Enzymes [BR:pagb01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     AWM79_03860
Secretion system [BR:pagb02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   AWM79_03860
  Eukaryotic Sec-SRP protein
   AWM79_03860
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin CbiA AAA_22 APS_kinase AAA_33 cobW AAA_31 KTI12 YqeC ParA AAA_24 6PF2K nSTAND3 Thymidylate_kin AAA_18 AAA_16 ABC_tran Mg_chelatase SLFN-g3_helicase AAA_17 AAA_5 ATP_bind_1 AAA_14 AAA_28 TsaE
Other DBs
NCBI-ProteinID: AMB84490
UniProt: A0A0X1SXW2
LinkDB
Position
851140..852516
AA seq 458 aa
MFENLTDRLSQTLRHVTGKAKLTEDNIKDTLREVRMALLEADVALPVVKDFVNSVRERAV
GTEVSRSLTPGQAFVKIVQAELESLMGAANEDLNLSAVPPAVILMAGLQGAGKTTTAGKL
ARFLKERKKKSVMVVSADVYRPAAIKQLETLANDIGVTFFPSDISQKPVDIAEAAIKEAR
LKFIDVVIVDTAGRLHIDAEMMGEIQQLHAAIKPVETLFVVDAMTGQDAANTAKAFGDAL
PLTGVILTKVDGDARGGAALSVRAITGKPIKFLGMGEKSEALDPFHPDRIASRILGMGDV
LSLIEQAEQTLDKDKADKLAKKLKKGKGFDLEDFRDQLQQMKNMGGLGGLMDKLPSIGGV
NLAQMGNAQGAAEKQFKQMEAIINSMTPAERRDPELISGSRKRRIAMGSGTQVQDIGRLI
KQHKQMQKMMKKFSAKGGMAKMMRGMGGMLPGGGMPKM
NT seq 1377 nt   +upstreamnt  +downstreamnt
atgtttgaaaacctgaccgaccgtctctcgcagacgctgcgccatgtcactggcaaggcc
aagctgaccgaagacaatatcaaagacaccctgcgtgaagtacgcatggcgttgctcgaa
gccgatgtcgccttgccggtggtgaaggacttcgtcaattcggtcagggaacgcgctgtc
ggcactgaagtgtcgcgcagcctgacgccgggtcaggcgttcgtgaagatcgtccaggcc
gagctcgaaagcctgatgggcgccgccaacgaagacctgaacctcagcgccgtgccgccg
gcggtcatcctgatggccggcctgcagggcgcgggcaagaccaccacggcgggcaagctg
gcgcgcttccttaaggagcgcaagaagaaaagcgtgatggtggtgtcggcggacgtatac
cgcccggcggcgatcaagcagttggaaaccctggccaacgacatcggcgtgacgttcttc
ccgtccgatatcagccagaaaccggtggatattgccgaagcggctatcaaggaagctcgt
ctcaagttcattgacgtggttatcgtcgacaccgccggtcgtctgcatatcgacgccgaa
atgatgggcgagatccagcaactgcacgcggcgatcaaaccggtggaaaccctgttcgtg
gtcgacgccatgaccggccaggacgccgccaacaccgccaaggcctttggcgatgcactg
ccgctgaccggcgtgatcctgaccaaggtcgatggcgatgcccgtggcggcgctgcgttg
tcggtccgcgccatcaccggcaaaccgatcaagttcctcggcatgggagaaaagagcgaa
gcgctcgaccccttccacccggaccggatcgcctcgcgcatcctcggcatgggcgacgtg
ctcagcctgatcgaacaggccgagcagaccctcgacaaggacaaggccgacaaactggcc
aagaagctgaagaagggcaagggcttcgaccttgaagactttcgcgaccagctacagcag
atgaagaacatgggcggtctcggtggcctgatggacaagctgccgagcatcggcggcgtc
aatctcgcgcagatgggcaatgcccagggggcggcggagaagcagttcaagcagatggaa
gcgatcatcaactccatgaccccggccgaacgtcgcgaccccgagttgatcagcggttcg
cgcaagcggcggattgccatgggttccggcacccaggtacaggacatcggtcgcttgatc
aagcagcataagcagatgcaaaagatgatgaagaaattctcggccaagggcggtatggcc
aagatgatgcgcggcatgggcggtatgctgcccggcggcggcatgccgaaaatgtaa

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