Pseudomonas agarici: AWM79_03975
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Entry
AWM79_03975 CDS
T11104
Name
(GenBank) spermidine/putrescine ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pagb Pseudomonas agarici
Pathway
pagb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pagb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AWM79_03975
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pagb02000
]
AWM79_03975
Transporters [BR:
pagb02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
AWM79_03975
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Phosphonate-bd
Motif
Other DBs
NCBI-ProteinID:
AMB84510
UniProt:
A0A0X1SXX3
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All DBs
Position
complement(876886..878037)
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AA seq
383 aa
AA seq
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MFAHKTALLSALTTAVLASVSLQAAEPLKAVGAAEGQLDIVAWPGYIERGESDKAYDWVT
GFEKETGCKVSVKTAATSDEMVSLMAKGGYDLVTASGDASLRLIAGKRVQPINPELIPNW
KNLDSRLKNAPWYVVDKQTYGTPYQWGPNVLMYNTHVFKQAPTSWAVIFDAQNLPDGKPN
KGRVQAYDGPIYIADAALYLKSAKPELGIQSPYELTETQYQAVLELLRAQQPLVHRYWHD
ATVQMSDFKNEGLAASSSWGYMVNGLQADKQPVASTIPKEGVTGWADTTMLHADAKHPNC
AYKWMDWSLQPKVQGDVAAWFGSLPAVPAACKGSELLGAEGCKTNGFDSFDKIAFWKTPQ
AQGGQFVPYSRWTQDYIAIMGGR
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcgcacaagaccgcgctactcagcgcactcaccaccgccgtgctggccagcgtc
agcctccaggccgccgaaccgctgaaagctgtcggcgccgctgaaggccaactcgatatc
gtcgcctggccgggttatatcgaacgtggtgaaagtgacaaggcttatgactgggtcacc
ggtttcgagaaggaaaccggctgcaaggtcagcgtgaagaccgccgccacctccgatgag
atggtcagtctgatggccaaaggcggctatgacctggtcaccgcttcaggcgacgcctcg
ttgcgcttgatcgccggcaaacgggtgcagccgatcaaccccgagttgatcccgaactgg
aagaacctcgattcgcgcctcaagaatgccccgtggtacgtggtcgacaaacagacctac
ggcaccccttaccagtggggcccgaatgtgctgatgtacaacactcacgtgttcaagcag
gcgccaaccagttgggcggtgatcttcgacgcgcagaacctgccggacggcaagccgaac
aaggggcgcgtgcaagcctatgacggcccgatctatatcgccgacgcggcgctgtatctc
aagtccgccaagccggagctgggaatccagagcccctatgaattaaccgagacccaatac
caggcggtcctcgaattgttgcgcgcccaacaaccgctggtgcaccgctattggcacgat
gcgaccgtgcaaatgagtgacttcaagaacgaaggcctcgccgcctccagctcctggggc
tacatggtcaatggcctgcaagccgacaaacaacccgtggcctcgaccattccaaaggag
ggcgtcaccggttgggccgacaccaccatgttgcacgccgatgccaaacaccccaactgc
gcctacaaatggatggactggtcgctgcagcccaaggtccagggtgacgtagcggcatgg
ttcggttcgctgccggccgttccggcggcgtgcaagggaagcgaactactcggcgccgaa
ggctgcaagaccaacggtttcgactccttcgacaagattgccttctggaaaaccccgcag
gcccagggtggccagtttgtcccctacagccgctggacccaggactatattgcgatcatg
ggcggtcgctaa
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