Pseudomonas agarici: AWM79_04245
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Entry
AWM79_04245 CDS
T11104
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
pagb Pseudomonas agarici
Pathway
pagb00541
Biosynthesis of various nucleotide sugars
pagb01100
Metabolic pathways
pagb01250
Biosynthesis of nucleotide sugars
Module
pagb_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
pagb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
AWM79_04245
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pagb01005
]
AWM79_04245
Enzymes [BR:
pagb01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
AWM79_04245
Lipopolysaccharide biosynthesis proteins [BR:
pagb01005
]
Lipid A
AWM79_04245
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
AMB84563
UniProt:
A0A0X1SXI2
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Position
937501..938346
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AA seq
281 aa
AA seq
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MAQKIIRVGGIEIANDKPMVLFGGMNVLESRDMAMQVCQEYVKVTEKLGIPYVFKASFDK
ANRSSVTSYRGPGLEEGMRIFQDIKQAFGVPIITDVHEPAQAAVVAEVCDIIQLPAFLSR
QTDLVVAMAKTGAVINIKKAQFLAPQEMKHILGKCVEAGNDQLILCERGSSFGYNNLVVD
MLGFGIMKQFEYPVFFDVTHALQMPGGRADSAGGRRAQVTDLAKAGMSQGLAGLFLEAHP
DPDNAKCDGPCALRLDKLEPFLAQLKALDELVKSFPTIETA
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggcccagaagatcattcgcgttggcggcatcgagatcgccaacgacaagccgatggtg
ctgttcggtggcatgaacgtgctggaaagccgtgacatggcgatgcaggtctgccaagag
tacgtcaaagtcaccgaaaagctcggtatcccctacgtgttcaaggccagcttcgacaag
gccaaccgttcctccgtgacctcctaccgtggccccggcctggaagagggcatgcgtatc
ttccaggacatcaagcaagcgttcggcgtgccgatcatcaccgacgtccacgagccggcc
caggccgccgtggttgccgaggtctgcgatatcatccagttgccggcctttctgtcgcgc
cagaccgacctggtggtcgccatggccaagaccggcgcggtgatcaacatcaagaaggcc
cagttcctcgcgccacaggaaatgaaacacatcctgggcaagtgcgtggaagccggcaac
gaccagttgatcctctgcgagcgtggttccagcttcggctacaacaacctggtggtcgac
atgctcggcttcggcatcatgaagcagtttgaatacccggtgttcttcgacgtgacccac
gccctgcagatgccgggcggtcgtgcggactccgccggcggtcgtcgggcccaggtcacc
gacctggccaaggccggcatgagccaggggctggcggggctgttcctcgaagcgcatccg
gacccggacaacgccaagtgcgacggtccttgcgccctgcgcctggacaagctggagccg
ttcctggctcaactcaaggcgctggatgagctagtgaagagttttccgacgatagaaacc
gcgtaa
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