Pseudomonas agarici: AWM79_04295
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Entry
AWM79_04295 CDS
T11104
Symbol
ispF
Name
(GenBank) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
KO
K01770
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:
4.6.1.12
]
Organism
pagb Pseudomonas agarici
Pathway
pagb00900
Terpenoid backbone biosynthesis
pagb01100
Metabolic pathways
pagb01110
Biosynthesis of secondary metabolites
Module
pagb_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
pagb00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
AWM79_04295 (ispF)
Enzymes [BR:
pagb01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.12 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
AWM79_04295 (ispF)
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GFIT
Motif
Pfam:
YgbB
Motif
Other DBs
NCBI-ProteinID:
AMB84573
UniProt:
A0A0X1SXJ1
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All DBs
Position
945812..946285
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AA seq
157 aa
AA seq
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MRIGHGYDVHRFAEGDFITLGGVRIAHHHGLLAHSDGDVLLHALSDALLGAAALGDIGKH
FPDTDPTYKGADSRVLLRHVVSLIKAEGWKVGNVDNTIVAQAPKMAPHIESMRALIAMDL
EVELDQVNVKATTTEKLGFTGREEGIAVHCVALLLRA
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattggccacggctatgatgtgcaccgtttcgccgaaggcgacttcatcactctg
ggcggcgtgcgcattgcacaccatcacggattgctggctcactccgatggcgacgtgttg
ctgcacgccctgagtgacgcgctgttgggggcggcggcacttggggacatcggcaaacat
ttcccggacaccgatcccacctataaaggcgccgacagccgcgtgctgttgcgccatgtg
gtgtctctgatcaaggccgagggttggaaggtcggtaatgtcgacaacaccatcgttgcc
caggcgccgaaaatggctccgcatatcgaatcgatgcgtgcgctgattgccatggatctt
gaagttgagttggatcaagtgaatgtaaaagccaccaccactgaaaagctcggctttacc
gggcgcgaagaaggcatcgcggtgcattgcgttgccttgttgttgcgcgcatga
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