Pseudomonas agarici: AWM79_05340
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Entry
AWM79_05340 CDS
T11104
Name
(GenBank) cystathionine beta-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
pagb Pseudomonas agarici
Pathway
pagb00260
Glycine, serine and threonine metabolism
pagb00270
Cysteine and methionine metabolism
pagb00450
Selenocompound metabolism
pagb00670
One carbon pool by folate
pagb01100
Metabolic pathways
pagb01110
Biosynthesis of secondary metabolites
pagb01230
Biosynthesis of amino acids
Module
pagb_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
pagb00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AWM79_05340
00270 Cysteine and methionine metabolism
AWM79_05340
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
AWM79_05340
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AWM79_05340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pagb04147
]
AWM79_05340
Enzymes [BR:
pagb01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
AWM79_05340
Exosome [BR:
pagb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
AWM79_05340
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AMB84763
UniProt:
A0A0X1SY43
LinkDB
All DBs
Position
complement(1207354..1208532)
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AA seq
392 aa
AA seq
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MSPYDTPTARPAFATRVIHAGQSPDPSTGALMPPIYANSTYLQESPGVHKGFDYGRSHNP
TRFALERCVADLEGGSQAFAFASGLAAIASVLELLDAGAHVVSGNDLYGGTFRLFDKVRQ
RSAGHRFSFVDLTDLSAFEAALREDTRMVWVETPSNPLLSLTDLAAVARLCRDRGIICVA
DNTFASPWIQRPLELGFDIVVHSTTKYLNGHSDVIGGIAVVGQNAELAERLGFLQNSVGA
IAGPFDAFLTLRGVKTLSLRMERHCSNALELATWLEQQPQVARVYYPGLASHPQHELARR
QMHGFGGMISVDLKSDLAGARRFLESVRIFALAESLGGVESLIEHPAIMTHATIPAPTRA
QLGIGDALVRLSVGVEDVQDLRADLAQALARI
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgagcccatacgacacacctaccgcacgccccgccttcgctacccgggtcatccatgcc
gggcagtcgccggacccgagcaccggggcgctgatgccgccgatctatgccaactccact
tatctgcaagagagccccggcgtacacaagggtttcgactacggacgctcccacaacccg
acgcggtttgccctggaacgctgtgtggcggatctcgaaggcggtagccaggccttcgcc
tttgcctcgggtctggcggcgattgccagcgtgctcgaattgctcgatgccggtgcccat
gtggtttccggcaacgacctctacggcggcactttccggctgttcgacaaggtgcgccag
cgtagcgccggccatcggttcagcttcgtcgacctgacggacctgagcgccttcgaagcg
gcgctgcgcgaggatacgcggatggtctgggtggagacgccgagcaaccccctgctgagc
ctcaccgacctggccgccgtcgcccgcctctgccgcgacagggggatcatctgcgtcgcc
gacaatacctttgccagtccctggatccagcgcccgctggaactgggttttgatatcgtg
gtgcactcgacgaccaagtacttgaacggccactcggacgtgatcggcggcatcgcggtg
gtcgggcaaaatgccgaactcgccgaacgcctgggatttctgcagaactcggtgggcgct
attgccgggccatttgatgccttcctcaccctacgcggtgtgaagaccctgtcgctgcgc
atggagcgccattgcagcaacgccctggaactggcgacctggctggaacagcagccacag
gtggcgcgtgtctattacccaggcctggcgtcgcacccgcaacacgaactggcacgccgg
cagatgcacggtttcggcgggatgatttctgttgacctgaagagcgacctggctggcgcc
aggcgcttcctcgaaagcgtgcggatcttcgccctggccgagagcctgggtggcgtggaa
agcttgatcgaacacccggcgatcatgacccacgccaccattcccgcaccgacgcgcgcg
caactcggtatcggcgacgctctggtccggctgtcggtgggtgtcgaggatgtccaagac
ctgcgggcggacctggcgcaggcgctggcgcgaatctaa
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