Pseudomonas agarici: AWM79_07235
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Entry
AWM79_07235 CDS
T11104
Name
(GenBank) Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pagb Pseudomonas agarici
Brite
KEGG Orthology (KO) [BR:
pagb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pagb03000
]
AWM79_07235
Transcription factors [BR:
pagb03000
]
Prokaryotic type
Helix-turn-helix
Other families
AWM79_07235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
HTH_8
Sigma54_activ_2
AAA_lid_14
GAF
PAS_4
PAS
PAS_9
AAA_5
HTH_23
Diguanyl_cycl_sensor
AAA_2
PAS_8
HTH_7
HTH_30
HTH_28
HTH_50
HVO_A0261_N
HTH_22
HTH_17
Mg_chelatase
AAA
Mga
HTH_AraC
RWP-RK
HTH_20
DUF5798
nSTAND3
dnstrm_HI1420
Motif
Other DBs
NCBI-ProteinID:
AMB85112
UniProt:
A0A0X1SZ54
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All DBs
Position
1654235..1656166
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AA seq
643 aa
AA seq
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MHNNHLSRHARQVLTVTQGRQQLHGPGSDPSIARSWLRCLEDYHLDPSLNVAPTVLEHDR
LLESRERLKHVLQIAGNEMTSLHQQLSGAGHAVLLTDSQGVILNCVTAATERRIFERAGL
WLGADWSEACEGTNGIGTCLVERQSLTIHQDEHFRGRHTGLTCSASPIFDPQGELLAVLD
VSSARPEVSRQSQFHTMALVNLSAKMIESCYFLRYYDKHWLLRFHLQAESVGLFSEGLLA
FDGAGRISAVNQSALNLLGHTRGELLGQSVDAFFDCPLDELFGRASAQASASWPLRTQDG
RGLFAVLRGQPRSVPKPLAPSPVSRERGNLSGICLGDEGLQNDFRKALRVFERDVPLLIN
GETGSGKEVFAKAVHRSSRRAQKAFVALNCAAIPESLIESELFGYRGGSFTGARKEGMRG
KLQQADGGTLFLDEIGDMPLALQTRLLRVLEDRQVVPIGGEPEAVNVRIVSATHRNLLER
VRDGSFREDLYYRLNGLEIGLAPLRERSDKSQLLDLLLAEEAAGQRVLIDAPARQALLDF
AWPGNVRQLRTVLRTLTALSDDGLIGMAHLPAMIRQTPPPNTPMALDRIPEHALEDAERL
ALLNALEQQRWHMTHTAEQLGISRNTLYRKLRKHGIARQGPRT
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgcacaacaaccatttgagtcgtcacgcccggcaggtgctgaccgtgacccaaggtagg
cagcagttgcatggcccaggcagcgatccgtccattgcccgctcctggctgcgctgtctt
gaggattatcacctcgacccttccttgaacgtcgctcccacggtacttgagcacgaccgc
ctgctggaaagtcgcgagcgcctcaaacacgtgctgcagatcgccggcaacgaaatgacc
agtctgcatcagcaactctccggcgccggtcatgcggtgttgctgaccgattcccagggc
gtgatcctcaactgtgtcaccgcagccaccgagcgccggatattcgagcgcgccgggctc
tggctcggcgccgactggagcgaggcctgtgaaggcaccaatggcattggcacctgcctg
gtggagcggcagtcgctgaccattcaccaggacgaacactttcgcggtcgccataccggc
ctgacctgctcggccagcccgatcttcgatccccagggtgaattgttggcggtgctggat
gtgtcctccgcgcgccccgaggtgtcccggcagagccaattccacaccatggccctggtg
aacctctcggcgaagatgatcgagagctgctatttcctgcgttattacgacaaacactgg
ttactgcgctttcacctgcaggccgagtccgtgggcctgttcagcgaggggctgctggcg
ttcgacggcgcagggcggatcagcgcggtcaaccagagcgccttgaacctgctgggacat
acccgcggcgagttgctggggcagtcggtggatgcttttttcgattgcccactggatgaa
ttgtttggccgtgcgagtgcccaggccagcgccagttggccgttacgcacacaggatggg
cgtgggttgttcgcggtgttgcgcggccagccgcgcagtgtgcccaagccattggcgccg
tcaccggtcagccgcgaacggggcaacctgtcgggcatttgcctgggcgatgagggcttg
cagaatgattttcgcaaggcgttgcgggtcttcgagcgcgatgtgccgttgctgatcaac
ggcgaaaccggctcgggcaaggaagtgttcgccaaggcggtgcatcggtccagtcggcgt
gcgcaaaaggcctttgtcgccctcaactgcgccgcgattccggaaagcctgatcgaaagt
gagttgtttggttatcgggggggcagttttaccggcgcacgcaaggaaggcatgcgtggc
aagttgcagcaggccgatggcggcacactgtttctcgatgagatcggcgatatgccgctg
gcattgcagacccgattgctgagggtgctggaggatcggcaggtggtgccgatcggtgga
gaacccgaagcggtcaatgtgcggattgtcagtgcgacccaccgtaatctgttggagcgg
gtgcgggacggcagcttccgcgaggatttgtattatcggctcaatgggttggaaatcggt
ttggcgcccttgcgtgaacgcagcgacaagtcccaattgctggatttgctgctggcggag
gaagccgccgggcagcgtgtgttgatcgatgcgccagcgcgccaggctctgctggatttc
gcctggccgggcaacgtgcggcagttgcgcacggtgctgcgcacgctaacggcgttgtct
gatgatggattgatcggtatggcgcacctgccggcgatgattcgccagacgccaccgccc
aacacgccgatggcgcttgaccggatcccggagcatgcgctggaagatgccgagcgcctg
gccttgctcaacgctctagagcagcagcgctggcacatgacccataccgccgagcaactg
gggatcagtcgcaataccctctatagaaagctgcgcaagcacggcatcgcccggcaaggc
cctcgaacctga
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