Pseudomonas agarici: AWM79_07885
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Entry
AWM79_07885 CDS
T11104
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
pagb Pseudomonas agarici
Brite
KEGG Orthology (KO) [BR:
pagb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pagb03032
]
AWM79_07885
03036 Chromosome and associated proteins [BR:
pagb03036
]
AWM79_07885
03400 DNA repair and recombination proteins [BR:
pagb03400
]
AWM79_07885
DNA replication proteins [BR:
pagb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AWM79_07885
Chromosome and associated proteins [BR:
pagb03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
AWM79_07885
DNA repair and recombination proteins [BR:
pagb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
AWM79_07885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
AMB85226
UniProt:
A0A0X1SZH0
LinkDB
All DBs
Position
complement(1805809..1806099)
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AA seq
96 aa
AA seq
DB search
MTKSELIERIVTHQGLLSSKDVELAIKTMLEQMSQCLATGDRIEIRGFGSFSLHYRAPRV
GRNPKTGQSVSLDGKFVPHFKPGKELRDRVNEEEEI
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagtcggagttgatcgaacgaattgtcacccatcaggggctgctttcatccaag
gatgtcgagctggccatcaagaccatgcttgagcaaatgtcccagtgcctggcgactggg
gaccggatcgaaattcgtgggttcggtagcttttcgttacattatcgagcgccgcgggtt
gggcgcaatcccaagaccgggcaatcagtgagcctggatggcaagtttgtgccgcatttc
aagccggggaaggagttaagggatcgggtgaatgaggaggaagaaatttag
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